Showing : gene expression data • reset
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Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lumi Package and limma package
limma lumi illumina gene expression data
updated 3.1 years ago by ▴ 10 • written 6.6 years ago by • 0
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fRMA results different for Windows and Linux
frma expr gene expression data affy
updated 6.7 years ago by 67k • written 6.7 years ago by • 0
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Interpreting Affymetrix Human Genome U133 Plus 2.0 samples
gene expression gene expression data cel affy affymatrix
7.0 years ago torgeirous • 0
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Job: Job: Computational Biologists - Expanding the impact of genomic data on drug development (Immuneering Corporation, Cambridge MA and New York NY)
rna-seq computational biology cns disease gene expression data neurodegeneration Job
7.3 years ago mmartin ▴ 20
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Possible(validated) methodology implemented in R for integrating and analyzing clinical data with gene expression data in R
data integration clinicaldata gene expression data PET
9.4 years ago svlachavas ▴ 840
5 results • Page 1 of 1
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Answer: Error compiling Rbowtie2 in R-4.4 (Bioconductor 3.20 and probably 3.19) by ja.garcia • 0
It has been fixed by the Rbowtie2 maintainers in version 2.12.2. Thank you for the quick fix!
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G by Amora • 0
You did a great job giving an overview.....[slope][1] better than the bioconductor group! [1]: https://slopeio.org
Comment: contrast matrix design for a continuous variable by dtzhu337 • 0
Hi Gordon, Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…
Answer: SingleCellExperiment convenience function for metadata+expression? by Peter Hickey ▴ 750
Hi Sarah, `scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…
Comment: How to sort negative log2FC or FC in RNAseq for GSEA? by QN ▴ 10
Thank you ATpoint for your response! In the result of GSEA, like you indicated, there will be gene sets that have positive NES and gene se…
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Answer: SingleCellExperiment convenience function for metadata+expression?
How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.
Answer: EdgeR Biological CVs
Answer: Error in download.file for TCGAutils::symbolsToRanges
Answer: Error in download.file for TCGAutils::symbolsToRanges
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