Bioconductor Genbankr

Showing : genbankr • reset

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607

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genbankr

3.5 years ago Lauren • 0

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2.3k

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genbankr

updated 4.4 years ago by Nicholas Cooley • 0 • written 4.4 years ago by heiko_kin ▴ 60

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1.7k

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granges genomic ranges genbankr ensembldb

updated 4.5 years ago by James W. MacDonald 68k • written 4.5 years ago by biomiha ▴ 20

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864

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genbankr parsing

5.0 years ago sean.c.m.booth • 0

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816

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genbankr

5.6 years ago jeyp • 0

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1.1k

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genbankr parseGenBank gbk error

5.8 years ago ashley.dederich • 0

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1.0k

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genbankr genbank annotation

6.7 years ago story.benjamin ▴ 20

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1.3k

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genbankr

updated 7.1 years ago by becker.gabriel ▴ 10 • written 7.4 years ago by Monther Alhamdoosh ▴ 40

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1.2k

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genbankr

updated 7.1 years ago by becker.gabriel ▴ 10 • written 7.2 years ago by inookaew • 0

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1.6k

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genbankr

updated 8.4 years ago by becker.gabriel ▴ 10 • written 8.4 years ago by Thomas Sandmann ▴ 90

10 results • Page 1 of 1

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Answer: Analyzing TnSeq data with DESeq2 by cold.wolverine.arku • 0

That's a great use case of DESeq2! Even though it's not specifically tailored for TnSeq data, your approach to normalize and run explorator…

Comment: RNA Seq using Lrt by Rob • 0

So if I have understood what you have said : If i want to see if Day (time) has an effect / is being tested - then the reduced model should…

Comment: How to convert transcript counts to gene counts in R? by ben • 0

Simply summing transcripts by gene is sufficient for use with DESeq2. [sprunki clicker][1] [1]: https://sprunkiclicker.com/

Answer: EuroBioC2024 abstract submission is open! by Ali • 0

[Promo products][1] are a smart way to boost visibility, especially with exciting updates like *News: EuroBioC2024 abstract submission is o…

Answer: ROAST for small sets by Gordon Smyth 52k

The p-values from `mroast` will be the same (up to sampling variability associated with random rotations) regardless of whether you test al…

Votes

Answer: ROAST for small sets

A: conceptual question about FDR, FDR adjusted p-value and q-value

Comment: edgeR::cpm() results in negative values from raw counts of 0

Awards • All

Popular Question to richardallenfriedmanbrooklyn ▴ 30

Scholar to Gordon Smyth 52k