Showing : gage package • reset
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GAGE for non model organism
gage package gage
6.5 years ago melkile26 • 0
1
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2
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1.4k
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GAGE analysis with the whole or a subset of matrix
gage gage package gene expression matrix gene set analysis
6.6 years ago atakanekiz ▴ 30
5
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7
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3.1k
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Gage package; go.gset() function error: argument "go_id" is missing
gage package error
updated 6.7 years ago by 68k • written 6.7 years ago by ▴ 20
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2
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4.1k
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Cannot open URL 'http://rest.kegg.jp/get/osaNA/kgml': HTTP status was '400 Bad Request'
gage gage package pathview rna-seq
updated 2.9 years ago by • 0 • written 7.0 years ago by • 0
2
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4
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2.2k
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Can't find gene list for KEGG genesets
kegg geneset genelist gage package
updated 7.5 years ago by 52k • written 7.5 years ago by ▴ 30
1
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0
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1.7k
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DESeq2 - GAGE workflow
gage package deseq2
7.5 years ago sup230 ▴ 30
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2
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1.9k
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How to extract essential genes from pathway (essGene) using DEseq2/GAGE workflow?
gage gage package
updated 8.3 years ago by ★ 1.6k • written 8.3 years ago by • 0
1
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2
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1.7k
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Need to convert gene IDs for GAGE pathway analysis of honey bee RNA-seq data
R gage package rnaseq pathview
8.5 years ago joanito.liberti • 0
0
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1
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1.1k
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Question on Gage
gage package path.ids RNA-Seq
8.5 years ago rl1385 • 0
0
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0
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1.1k
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GAGE package statistical tests
t-test GAGE package Kolmogorov-Smirnov test Gene-Set enrichment
8.6 years ago smt8n • 0
10 results • Page 1 of 1
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Answer: DESeq2 adujsted p-value cutoff seemingly not working by James W. MacDonald 68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by SofieK • 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data by deltaexploitss • 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status by Renuka • 0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode = by James W. MacDonald 68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
Votes
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
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