Showing : fusion genes • reset
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How to interpret the fusion.txt file output from subjunc (Rsubread package)
rsubread subjunc rnaseq fusion genes
updated 9.6 years ago by ★ 3.6k • written 9.6 years ago by • 0
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How to analyze a known fusion gene expression in RNAseq
fusion genes rnaseq
9.9 years ago stephen66 ▴ 50
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Problem Importing STAR fusion data into chimera
fusion genes chimera star
updated 10.0 years ago by • 0 • written 10.3 years ago by • 0
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Problem with gene annotation used in chimera package for fusion analysis
chimera package fusion genes annotation
10.0 years ago richa_r • 0
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Answer: EuroBioC2023 abstract submission is open! by cirwin009 • 0
Submit here https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/ [Block Blast][1] This article offers a thorough and in-depth…
Comment: How to formulate 2 factor nested design in DESeq2 by Mariane • 0
Hi JK Kim, I'm having a problem similar to the one you reported. Could you please tell me how you solved this problem? Thanks
Comment: batch effect removal for agilent microarray data by gaye.yilmaz • 0
Thank you
Answer: Pathview visualisation not including positive log2 fold changes by James W. MacDonald 68k
Without providing a self-contained example, nobody can tell you if/where you went wrong. Since you get a KEGG pathway with some of the gene…
Comment: Differential variance analysis - can i use deseq2 by Marwan • 0
Thanks Michael for your answer, i didnt mean to use Deseq2 directly for the variance testing, but more like asking if using the (VST) data…
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Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
A: How to extract DESeq2 results for an interaction design
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
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