Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
fry
•
reset
1
vote
2
replies
734
views
Can fry() be used on infinium methylation array data to call differential methylation?
limma
infinium
fry
2.1 years ago
mark.ziemann
• 0
2
votes
2
replies
2.0k
views
Finding genes in a gene set detected by ROAST (or FRY) in limma
roast
fry
limma
updated 5.4 years ago by
Gordon Smyth
51k • written 5.4 years ago by
kentfung
▴ 20
0
votes
2
replies
1.1k
views
mroast/fry with gene weights for most or all genes
limma
mroast
fry
updated 6.2 years ago by
Gordon Smyth
51k • written 6.2 years ago by
maltethodberg
▴ 180
3
votes
3
replies
1.1k
views
Conditions for using Fry
limma
mroast
fry
updated 6.3 years ago by
Gordon Smyth
51k • written 6.3 years ago by
siajunren
• 0
4 results • Page
1 of 1
Recent ...
Replies
Comment: Appropriate ways to filter counts data for voom/limma
by
dorothylminter
• 0
The proper way to filter count data for voom/limma emphasizes the importance of choosing the right filtering technique to enhance detection…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
by
Robert Castelo
★ 3.4k
Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…
Comment: DESeq2 rerun returns different results
by
ATpoint
★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ]
by
Gordon Smyth
51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
by
rania.alanany
• 0
Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…
Votes
A: Some questions for remove batch effect by using mnnCorrect
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: [How to construct a model.matrix ]
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
Awards
• All
Popular Question
to
Robert Castelo
★ 3.4k
Popular Question
to
Michael Stadler
▴ 350
Scholar
to
ATpoint
★ 4.5k
Commentator
to
James W. MacDonald
67k
Popular Question
to
Stefano Mangiola
▴ 20
Locations
• All
United Kingdom,
just now
United Kingdom,
1 minute ago
Italy,
5 minutes ago
France,
19 minutes ago
WEHI, Melbourne, Australia,
33 minutes ago
Traffic: 759 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6