Bioconductor Flowmerge

Showing : flowmerge • reset

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flowmerge

8.0 years ago adlerj • 0

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flowmerge

8.0 years ago adlerj • 0

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1.3k

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flowmerge MFI

updated 9.1 years ago by Greg Finak ▴ 240 • written 9.4 years ago by veronikag • 0

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flowMerge flowMerge

11.4 years ago oscar Jottrand ▴ 10

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flowMerge flowMerge

updated 12.4 years ago by Kevin Schiesser ▴ 10 • written 12.4 years ago by Kevin Schiesser ▴ 40

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Cancer flowMerge Cancer flowMerge

13.9 years ago Greg Finak ▴ 240

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Cancer flowMerge Cancer flowMerge

updated 13.9 years ago by Greg Finak ▴ 150 • written 13.9 years ago by Greg Finak ▴ 240

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Cancer flowMerge iFlow Cancer flowMerge iFlow

15.2 years ago Josef Spidlen ▴ 140

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1.3k

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flowMerge iFlow flowMerge iFlow

updated 15.2 years ago by Vincent J. Carey, Jr. 6.7k • written 15.2 years ago by Philipp Meng ▴ 20

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Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Follow up question, is this the correct way to extract results? ```r results <- results(ddsObj, list(c("GroupControl.Followup", "GroupTrea…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Thank you for your reply! I would love to know your thoughts on the plots I've included above. > 'Are the differences between groups lar…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

I also realised that the other gene I pointed out that was flagged as DE but had similar count differences also shows that rep1 is lower th…

Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Thanks that's great!! I've followed the instructions from the link you sent, is my code correct? By correct I mean, is my code comparing fo…

Comment: SingleR with multiple single cell references by maltethodberg ▴ 180

Great - the approach with merging the atlases and using `block=` worked well!

Votes

Comment: DESeq - help with pair wise comparisons

Answer: Is random access by row index possible for an indexed VCF file?

Answer: SingleR with multiple single cell references

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