Bioconductor Fastmnn

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665

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fastMNN SingleCellData BatchEffect batchelor

4 months ago José • 0

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1.5k

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scanpy scRNAseq fastmnn r

2.4 years ago Madiha • 0

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1.6k

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batchelor fastMNN scRNAseq

2.5 years ago Guandong Shang ▴ 40

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2.6k

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scater batchelor scRNAseq fastMNN

updated 2.5 years ago by Aaron Lun ★ 28k • written 2.6 years ago by Guandong Shang ▴ 40

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1.4k

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fastmnn batchelor BatchEffect

3.4 years ago p.joshi ▴ 40

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1.5k

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fastmnn scater batchelor

updated 4.7 years ago by Aaron Lun ★ 28k • written 4.7 years ago by ATpoint ★ 4.7k

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762

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fastMNN Interpretation

4.7 years ago mloza ▴ 10

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1.3k

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batchelor batch-correction mnncorrect fastmnn rna-seq

updated 4.9 years ago by Aaron Lun ★ 28k • written 5.5 years ago by firestar ▴ 20

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1.8k

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fastMNN CITE-seq ADT-seq batchelor REAP-seq

updated 4.9 years ago by Aaron Lun ★ 28k • written 4.9 years ago by sorjuelal • 0

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1.6k

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SCRAN fastMNN mnnCorrect

updated 6.6 years ago by Aaron Lun ★ 28k • written 6.6 years ago by tobi • 0

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Comment: normalizatino of dna methylation EPIC data by user_bioinfo • 0

yes actually that's why I did, and its all good! thank you for your response

Comment: batch effect removal for agilent microarray data by gaye.yilmaz • 0

Hello again, Can using inSilicoMerging handle this situation?

Answer: normalizatino of dna methylation EPIC data by James W. MacDonald 68k

Your code doesn't show the error? Anyway, the default for `colMeans2` is useNames = TRUE, and the call to `colMeans2` in `preprocessNoob…

Answer: WGCNA by James W. MacDonald 68k

This support site is meant to help people with technical questions about using Bioconductor packages, rather than as a place to get analysi…

Answer: EuroBioC2023 abstract submission is open! by cirwin009 • 0

Submit here https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/ [Block Blast][1] This article offers a thorough and in-depth…

Votes

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: normalizatino of dna methylation EPIC data

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

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Popular Question to Wolfgang Huber ★ 13k