Bioconductor Exprs

Showing : exprs • reset

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2.6k

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ALL bioconductor biobase exprs

updated 6.3 years ago by Martin Morgan 25k • written 6.3 years ago by detroit.drive • 0

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1.1k

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affy exprs intensity

updated 6.5 years ago by James W. MacDonald 67k • written 6.5 years ago by elmira.amiri • 0

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3.4k

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exprs dplyr Biobase

6.5 years ago Wolfgang Huber ★ 13k

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1.5k

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Mas5 normalization Exprs

updated 7.0 years ago by James W. MacDonald 67k • written 7.0 years ago by kritikamish99 ▴ 10

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1.5k

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Exprs Lapply FCS for loop flowcore

updated 7.0 years ago by Jiang, Mike ★ 1.3k • written 7.0 years ago by Wilson Yeo • 0

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1.3k

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affy exprs multicore

7.7 years ago Fiona • 0

6 results • Page 1 of 1

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Comment: How many of my genes from my gene list are in each KEGG pathway? by josephasmith1310 • 0

> You can compare the number in the column setSize versus the number of > genes in core_enrichment. The former corresponds to the number of…

Comment: EuroBioC2024 abstract submission is open! by Esperan • 0

Great information about the EuroBioC2024 conference! https://openreview.net/group?id=bioconductor.org/EuroBioC/2024/Conferences [slope](htt…

Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k

I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…

Comment: Adjusted p-values become NA when sub-setting samples by txema.heredia • 0

Thanks! I've been looking into DESeq2's code and, indeed, I get matching results when running manually the code inherited from the `genefi…

Answer: DESeq2 interaction between cancer cells and microenvironment cells by Michael Love 42k

I don't really know what you mean by "come from the contamination". You can look at the main effects and the interaction, but I don't know …

Votes

A: p.adjust BH generates duplicate values

Answer: Adjusted p-values become NA when sub-setting samples

Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

Awards • All

Supporter to Paul Harrison ▴ 100

Popular Question to Mikhail Dozmorov ▴ 30