Bioconductor Ensembl release

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ensembldb ensembl release rnaseq salmon tximport

7.2 years ago emmak ▴ 20

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txtimport deseq2 ensembl release

updated 8.0 years ago by James W. MacDonald 68k • written 8.0 years ago by jarod_v6@libero.it ▴ 40

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ensembl biomart ensembl release ensembl mart News

8.5 years ago Thomas Maurel ▴ 800

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ensembl biomart release85 ensembl release mart News

8.7 years ago Thomas Maurel ▴ 800

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ensembl mart release84 biomart ensembl release News

updated 9.0 years ago by arielpaulson ▴ 20 • written 9.1 years ago by Thomas Maurel ▴ 800

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ensemble mart ensembl biomart ensembl release News

9.3 years ago amonida ▴ 20

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Comment: DiffBind can't find a DAR by ATpoint ★ 4.8k

"My cake does not look as advertised in the recipe", with this sloppy sentence I hope you understand that you need to give people details, …

Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Follow up question, is this the correct way to extract results? ```r results <- results(ddsObj, list(c("GroupControl.Followup", "GroupTrea…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Thank you for your reply! I would love to know your thoughts on the plots I've included above. > 'Are the differences between groups lar…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

I also realised that the other gene I pointed out that was flagged as DE but had similar count differences also shows that rep1 is lower th…

Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Thanks that's great!! I've followed the instructions from the link you sent, is my code correct? By correct I mean, is my code comparing fo…

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Comment: DESeq - help with pair wise comparisons

Answer: Is random access by row index possible for an indexed VCF file?

Answer: SingleR with multiple single cell references

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