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BioinfGuru
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Answer: Problems with GSEA
by
Guido Hooiveld
★
4.1k
The error `Duplicate values in names(stats) not allowed` (from `fgsea` that is used under the hood) shows that the input is not unique; in …
Answer: Error compiling Rbowtie2 in R-4.4 (Bioconductor 3.20 and probably 3.19)
by
ja.garcia
•
0
It has been fixed by the Rbowtie2 maintainers in version 2.12.2.
Thank you for the quick fix!
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
Amora
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0
You did a great job giving an overview.....[slope][1] better than the bioconductor group!
[1]: https://slopeio.org
Comment: contrast matrix design for a continuous variable
by
dtzhu337
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0
Hi Gordon,
Thank you very much for your answer. Actually the variable X is the age, which I am also interested in. Somehow, age and V1 are…
Answer: SingleCellExperiment convenience function for metadata+expression?
by
Peter Hickey
▴
750
Hi Sarah,
`scuttle::makePerCellDF()` / `scuttle::makePerFeatureDF()` and `scater::ggcells()` / `scater::ggfeatures()`, which build upon th…
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