Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ebseq
•
reset
0
votes
1
reply
737
views
EBTest error please add gene/isoform names to the data matrix
EBSeq
4.5 years ago
lli2
• 0
0
votes
3
replies
1.1k
views
Heatmap for ebseq2 output
ebseq
5.5 years ago
drkousi31
• 0
5
votes
1
reply
1.2k
views
DE analysis when large portion of transcriptome is changed
rna-seq
edger
ebseq
differential expression
updated 6.4 years ago by
Aaron Lun
★ 28k • written 6.4 years ago by
marhabaie
• 0
0
votes
0
replies
1.1k
views
[EBSEQ] Strange NA values
ebseq
differential gene expression
8.4 years ago
jean.keller
▴ 10
0
votes
0
replies
1.1k
views
[EBSeq] Normalization and DE genes detection
ebseq
normalization
differential gene expression
8.5 years ago
jean.keller
▴ 10
1
vote
1
reply
1.3k
views
EBSeq-HMM: retrieving expression paths for genes differing by time AND treatment
ebseq
ebseq-hmm
rna-seq
9.1 years ago
vieuphoria
▴ 10
0
votes
0
replies
1.0k
views
Matching New Samples to Differential Expression Profile
differential expression
ebseq
rnaseq
9.4 years ago
jbarker2
• 0
0
votes
0
replies
1.5k
views
How to fully use the list of DEGs in non model species?
deseq2
gage
ebseq
rnaseq
9.4 years ago
jackipchiho
▴ 10
0
votes
2
replies
1.5k
views
EBSeq package gives NaN Values for EBMultiTest
differential expression
ebseq
rnaseq
9.6 years ago
jbarker2
• 0
0
votes
2
replies
3.1k
views
DE analysis with reference transcriptome
Sequencing
GO
Organism
edgeR
DESeq
EBSeq
Sequencing
GO
Organism
edgeR
DESeq
EBSeq
updated 10.5 years ago by
James W. MacDonald
67k • written 10.5 years ago by
Nicole Ertl
▴ 10
0
votes
1
reply
1.8k
views
TCC::ERROR: Need the design matrix for GLM
DifferentialExpression
Normalization
Cancer
edgeR
baySeq
DESeq
EBSeq
TCC
Normalization
updated 10.6 years ago by
Koji Kadota
▴ 10 • written 10.6 years ago by
Gordon Smyth
51k
0
votes
1
reply
2.0k
views
TCC::ERROR: Need the design matrix for GLM.
DifferentialExpression
Normalization
Cancer
edgeR
baySeq
DESeq
EBSeq
TCC
Normalization
updated 10.6 years ago by
Jianqiang SUN
▴ 10 • written 10.6 years ago by
Pankaj Agarwal
▴ 100
0
votes
0
replies
1.2k
views
EBSeq Results Affected By Outlying Values
EBSeq
EBSeq
10.8 years ago
Dario Strbenac
★ 1.5k
13 results • Page
1 of 1
Recent ...
Replies
Answer: Deseq2 res Function
by
Michael Love
43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR
by
Gordon Smyth
51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data
by
Gordon Smyth
51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix?
by
NB
• 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix?
by
James W. MacDonald
67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Votes
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
Awards
• All
Popular Question
to
sap275
▴ 10
Popular Question
to
mhem
▴ 10
Popular Question
to
Anna
▴ 20
Scholar
to
Haibo Liu
▴ 20
Popular Question
to
Talip
▴ 10
Locations
• All
Germany,
21 minutes ago
The city by the bay,
24 minutes ago
WEHI, Melbourne, Australia,
27 minutes ago
France,
27 minutes ago
United Kingdom,
45 minutes ago
Traffic: 453 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6