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duplicate
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GenomicInteractions duplicate annotations
duplicate
GenomicInteractions
4.7 years ago
dogancan
• 0
1
vote
3
replies
3.4k
views
duplicated row names when creating DESeqDataSetFromMatrix
deseq2
DESeqDataSetFromMatrix
duplicate
updated 6.9 years ago by
James W. MacDonald
68k • written 6.9 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
4
replies
1.8k
views
calling combineFeatures twice causes duplicate row.names
msnbase
duplicate
rforproteomics
updated 7.0 years ago by
Laurent Gatto
1.6k • written 7.0 years ago by
joris.vanhoutven
▴ 10
2
votes
1
reply
1.8k
views
How to remmove duplicated paired end alignments
alignment
duplicate
updated 8.1 years ago by
Aaron Lun
★ 28k • written 8.1 years ago by
Frocha
▴ 20
3
votes
16
replies
4.9k
views
Any way to proceed duplicate removal for list of GRanges object ?
r
grangeslist
duplicate
updated 8.1 years ago by
Martin Morgan
25k • written 8.1 years ago by
Jurat Shahidin
▴ 80
3
votes
3
replies
2.2k
views
getBM function, search for annotation characteristics with entrezgene filters --> result with duplicates
getBM
entrez gene identifiers
duplicate
rnaseq
8.1 years ago
Jose Luis Soto Vázquez
• 0
6 results • Page
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Answer: DESeq2 adujsted p-value cutoff seemingly not working
by
James W. MacDonald
68k
From `?results' ``` On p-values: By default, independent filtering is performed to select a set of genes for multiple tes…
Comment: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
SofieK
• 0
Thank you, I will try this and see.
Comment: DiffBind - question on the use of filtered or unfiltered input data
by
deltaexploitss
• 0
Data input is the adding of data into a computer. This can take place through an input device such as a keyboard. A user inputs data, which…
Comment: GenomeInfoDbData cannot install in R and warning had non-zero exit status
by
Renuka
• 0
how you did it pls explain
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
by
James W. MacDonald
68k
If I understand correctly, you want to assess differential transcript abundances. If so, there are a couple of ways you can do that. One wa…
Votes
A: Effect of lfcThreshold on p-value in DESeq2
Answer: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
What benchmark should I use for setting the EdgeR filterByExpr min.count parameter?
Answer: Issue with assigning transcript IDs to reads when using summarizeOverlaps(mode =
Comment: Unused arguments error without used arguments in GSVA?
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