Showing : drosophila melanogaster • reset
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Scan issue retrieving Drosophila Genes with biomaRt
R biomart drosophila melanogaster ensembl
updated 6.8 years ago by ★ 6.6k • written 6.8 years ago by • 0
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DESeq2: relevel contrasts after DESeq() has been called (time-course experiment of Drosophila development)
drosophila melanogaster multiple time points deseq2 results development
updated 7.7 years ago by 42k • written 7.7 years ago by • 0
6
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Error in .checkKeys(value, Lkeys(x), x@ifnotfound)
Gostats go term annotation drosophila melanogaster error
updated 7.8 years ago by ▴ 10 • written 8.5 years ago by ▴ 300
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forge masked genome
bsgenome drosophila melanogaster bsgnome forge
8.0 years ago nadia.goue • 0
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RNA-seq analysis with R/BioC: alignment and read counts
drosophila melanogaster quasR genomicfeatures genomicranges alignment
updated 9.3 years ago by 16k • written 9.4 years ago by ▴ 70
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Genome side annotation for drosophila
genome annotation drosophila melanogaster org.Mm.eg.db
updated 9.6 years ago by ★ 7.2k • written 9.6 years ago by ▴ 20
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promoter definition in VariantAnnotation
VariantAnnotation promoter drosophila melanogaster
updated 9.8 years ago by ★ 6.8k • written 9.8 years ago by ▴ 30
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PhD student in Quantitative Genetic Models of Complex Traits
Sequencing Genetics Drosophila melanogaster Sequencing Genetics Drosophila melanogaster
11.7 years ago Peter Sørensen (HAG) ▴ 60
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[Engineers for ensemblgenomes.org #251937] BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info …
Drosophila melanogaster TranscriptDb biomaRt GenomicFeatures genomes Drosophila melanogaster
12.4 years ago Malcolm Cook ★ 1.6k
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Ensembl mart release 56: Useful information
GO Anopheles gambiae Drosophila melanogaster genomes GO Anopheles gambiae genomes
15.1 years ago Rhoda Kinsella ▴ 660
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Vsn transformation repeatability
Microarray Drosophila melanogaster drosophila2 Microarray Drosophila melanogaster drosophila2
updated 16.1 years ago by ★ 13k • written 16.1 years ago by ▴ 320
11 results • Page 1 of 1
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Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…
Comment: Merge Replicates vs Mixed Model by abadgerw • 0
@gabrielhoffman any insight?
Comment: makeContrastsDream for Interaction by abadgerw • 0
@gabrielhoffman any insight?
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta by Michael Love 42k
That is the rows that did converge.
Votes
A: Some questions for remove batch effect by using mnnCorrect
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: [How to construct a model.matrix ]
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
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