Bioconductor Download

Showing : download • reset

votes

replies

611

views

download fgsea

16 months ago luca.s ▴ 50

vote

883

views

BiocManager::install download

updated 4.9 years ago by Martin Morgan 25k • written 4.9 years ago by lejeczek ▴ 10

votes

replies

1.3k

views

download

updated 5.4 years ago by kayla.interdonato ▴ 160 • written 5.4 years ago by kenneth.hoste ▴ 20

vote

replies

2.6k

views

TCGAbiolinks TCGA Download

updated 5.8 years ago by Tiago Chedraoui Silva ▴ 260 • written 5.8 years ago by modarzi ▴ 10

votes

772

views

download

6.7 years ago Lb408 • 0

votes

replies

2.6k

views

TCGA tcgabiolinks download error

updated 7.2 years ago by eshelden ▴ 40 • written 7.2 years ago by Talip ▴ 10

votes

1.4k

views

tcgabiolinks TCGA DOWNLOAD

updated 7.3 years ago by James W. MacDonald 67k • written 7.3 years ago by sup230 ▴ 30

vote

replies

1.5k

views

biocinstaller bioconductor download

7.7 years ago s.munster ▴ 40

votes

replies

2.2k

views

download biocinstaller

9.5 years ago kenneth.hoste ▴ 20

votes

1.5k

views

course-material download software error

updated 9.7 years ago by Dan Tenenbaum ★ 8.2k • written 9.7 years ago by jdavison ▴ 10

votes

replies

1.3k

views

bioconductor download

updated 9.8 years ago by Hervé Pagès 16k • written 9.8 years ago by kristoffer.vittingseerup ▴ 20

votes

2.1k

views

download installation

updated 10.2 years ago by Andrzej Oleś ▴ 750 • written 10.2 years ago by yxswhx • 0

12 results • Page 1 of 1

Recent ...

Replies

Comment: Incorporating Salmon offset matrix into Wilcoxon DEG analysis by Gordon Smyth 52k

It is not possible to use both. estimateGLMRobustDisp() estimates negative binomial dispersions for each gene, whereas glmQLFit() estimates…

Comment: Incorporating Salmon offset matrix into Wilcoxon DEG analysis by Andre • 0

Thank you. What is the difference between setting robust=TRUE in glmQLFit and estimateGLMRobustDisp? The paper i mentioned in the post used…

Comment: PCA of different bacterial species by Jeremy • 0

Your approach of using ~2500 single-copy orthologs and normalizing with VST or rlog for PCA is valid for exploring general clustering [pap…

Comment: RnBeads::combine() - error? by Urotree • 0

pheno <- rnb.set.arrays@pheno # Phenotypic data sites <- rnb.set.arrays@sites # CpG site definitions (data.frame) meth <- rnb.set…

Comment: RnBeads::combine() - error? by Urotree • 0

![enter image description here][1] [1]: /media/images/40d9778d-b044-4405-9b3d-2ba835f6 Hi, after I convert to RnBiseqSet, it shows "All…

Votes

C: How does edgeR cpm function calculate log(CPM) values?

Answer: Incorporating Salmon offset matrix into Wilcoxon DEG analysis

scater/scran with TPMs from Salmon - counts?

A: Full length single-cell RNA-seq - tximport output for downstream analysis

Awards • All