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dmrseq
•
reset
4
votes
9
replies
1.1k
views
Memory errors using read.bismark?
dmrseq
bsseq
9 months ago • updated 8 months ago
Juan Higareda
• 0
0
votes
1
reply
678
views
dmrseq and polymorphisms
dmrseq
updated 16 months ago by
keegan
▴ 60 • written 21 months ago by
giancarlo.castellano
• 0
0
votes
1
reply
938
views
dmrseq on a subset of genomic regions
dmrseq
updated 3.8 years ago by
keegan
▴ 60 • written 3.9 years ago by
KIR_F
• 0
0
votes
0
replies
1.1k
views
Deconvolution methods from WGBS data (methylation)
methylCC
deconvolution
methylation
dmrseq
serum
4.8 years ago
marcin.bazyliszek
• 0
0
votes
1
reply
894
views
Suggestion dmrseq: generate Error when the adjustCovariate(s) generates a design that is not full rank
dmrseq
methylation
5.3 years ago
sorjuelal
• 0
0
votes
1
reply
918
views
unequal sample sizes in groups for testCovariate argument in dmrseq
dmrseq
5.5 years ago
Stephanie Hicks
▴ 80
1
vote
1
reply
1.7k
views
Using surrogate variables as covariates in WGBS differential methylation calling
dmrseq
sva
DSS
updated 5.6 years ago by
keegan
▴ 60 • written 5.6 years ago by
gjl
▴ 10
1
vote
4
replies
1.9k
views
dmrseq error: promise already under evaluation??
dmrseq
Methylation
updated 5.6 years ago by
keegan
▴ 60 • written 5.6 years ago by
sorjuelal
• 0
6
votes
5
replies
1.6k
views
dmrseq installation failed
installation problem
dmrseq
bumphunter
updated 6.2 years ago by
shepherl
4.1k • written 6.2 years ago by
guy.bioinfo
▴ 10
3
votes
16
replies
2.6k
views
Internal bug of DMR-Seq?
dmrseq
updated 6.3 years ago by
keegan
▴ 60 • written 6.3 years ago by
kuckunniwid
• 0
0
votes
3
replies
1.2k
views
DMRseq smoothed values
dmrseq
updated 6.5 years ago by
keegan
▴ 60 • written 6.5 years ago by
swebb1
• 0
0
votes
3
replies
1.5k
views
Determination of Hypo- or Hyper- methylation
dmrseq
bsseq
updated 6.7 years ago by
James W. MacDonald
67k • written 6.7 years ago by
Bruno Verstraeten
• 0
2
votes
2
replies
1.7k
views
dmrseq: cannot adjust for a covariate
dmrseq
dmr
dmrs
bisulfite
methylation
updated 6.9 years ago by
keegan
▴ 60 • written 7.0 years ago by
l.kremer
• 0
13 results • Page
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Comment: Unused arguments error without used arguments in GSVA?
by
1sunmic2
• 0
It was due to the comma. Thank you!
Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Votes
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
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