Bioconductor Design formula

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deseq2 design formula log fold change

updated 6 months ago by Michael Love 43k • written 4.6 years ago by jason.taotaotan ▴ 40

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deseq2 design formula

updated 5.1 years ago by swbarnes2 ★ 1.4k • written 5.1 years ago by tracecakes • 0

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deseq2 rnaseq repeated measures time series design formula

updated 5.1 years ago by Michael Love 43k • written 5.1 years ago by Dorien ▴ 10

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deseq2 design design formula time course lrt

updated 5.1 years ago by Michael Love 43k • written 5.1 years ago by ac_bioinformatics • 0

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deseq2 design formula design matrix edgeR ATAC

updated 5.2 years ago by Gordon Smyth 52k • written 5.2 years ago by corinne_hutfilz • 0

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Comment: graper 1.22 Build is Broken by shepherl 4.1k

This is not an appropriate place to report this. this is for usage questions. maintainers are notified automatically when it is failing on …

Comment: graper 1.22 Build is Broken by shepherl 4.1k

This post does not fit the theme of this forum.

Comment: Unbalanced experiment with multiple samples from each patient. by canarias • 0

Hi Aaron, I'm faced with an analysis that has basically the same problem as OP had, but is probably even more unbalanced: In most cases, I…

Comment: Gene Set Enrichment Analysis in Bioconductor course by info ▴ 10

If you are interested in Gene Set Enrichment Analysis in R, you can still join us next week for this 4-day Physalia course on GSEA in R and…

Comment: cannot download atena annotation for human by Davide • 0

That's the error that comes up: > rmskann <- atena::annotaTEs(genome = "hg38", parsefun = "rmskbasicparser") Connecting to the Ann…

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A: Unbalanced experiment with multiple samples from each patient.

Unbalanced experiment with multiple samples from each patient.

Answer: Vertical line at A=0, nothing else, on MA plot

Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct

Answer: Group-specific condition effects with individuals nested: matrix is not full ra

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Popular Question to James W. MacDonald 68k