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Job: PhD Studentship in Computational Biology and Machine Learning @ University of Cambridge (application deadline November 15th 2019)
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5.4 years ago Shamith.Samarajiwa ▴ 180
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Job: Research Assistant position (Fixed Term -12 months initially - application deadline 9th June) in Machine Learning & Computational Cancer Genomics @ …
cancer deep learning genomics Job
5.9 years ago • updated 5.7 years ago Shamith.Samarajiwa ▴ 180
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Data preparation and Machine learning on time course RNAseq data
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6.2 years ago A ▴ 40
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Job: CRUK Cambridge Centre MRes + PhD in Cancer Biology (Cross-Programme Quantitative Projects)
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Job: Postdoctoral Research Associate (Fixed Term) - Data Scientist / Computational Biologist, University of Cambridge, UK
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6.9 years ago Shamith.Samarajiwa ▴ 180
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Job: Post Doctoral position in AI (Deep learning / Machine learning) approaches for Cancer Research, MRC Cancer Unit, University of Cambridge, UK
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Job: PhD opportunity in Cambridge (Computational Biology and Data Science)
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7.4 years ago • updated 7.3 years ago Shamith.Samarajiwa ▴ 180
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Job: Summer Studentships in Data Science (Computational Cancer Biology) at the University of Cambridge
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7.9 years ago Shamith.Samarajiwa ▴ 180
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Comment: how many significant figures are there in DESeq2 output by ATpoint ★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression by Jane • 0
why aren't there any answers?
Comment: Too many significant genes when integrating gtex and tcga by Jane • 0
I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
Comment: how many significant figures are there in DESeq2 output by Matthew McCormack ▴ 180
Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to by ATpoint ★ 4.7k
No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
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