Bioconductor DdCt

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166

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ddCt

updated 6 days ago by James W. MacDonald 67k • written 6 days ago by arustagi • 0

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729

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BiocGenerics ddCt

updated 19 months ago by dr ▴ 10 • written 21 months ago by Arielle ▴ 10

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723

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ddCt efficiency gene specific efficiencies

updated 4.7 years ago by Zhang, Jitao David ▴ 120 • written 4.7 years ago by bettenbrock • 0

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964

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ddCt import analysis R qRTPCR

updated 5.2 years ago by Zhang, Jitao David ▴ 120 • written 5.2 years ago by mohammedtoufiq91 ▴ 10

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2.0k

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qPCR ddCt geneexpression

updated 7.3 years ago by Zhang, Jitao David ▴ 120 • written 7.3 years ago by rbronste ▴ 60

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2.7k

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ddct qPCR

updated 3.4 years ago by Pengcheng Yang ▴ 60 • written 9.6 years ago by gv ▴ 40

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2.2k

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ddCt HTqPCR ReadqPCR ddCt HTqPCR ReadqPCR

10.5 years ago Guest User ★ 13k

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1.4k

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annotate ddCt HTqPCR annotate ddCt HTqPCR

10.7 years ago Cornwell, Adam ▴ 110

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1.6k

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qPCR ddCt qPCR ddCt

11.2 years ago Guest User ★ 13k

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1.3k

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convert qpcrNorm ddCt HTqPCR ReadqPCR convert qpcrNorm ddCt HTqPCR ReadqPCR

11.7 years ago Guest User ★ 13k

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1.7k

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qPCR limma ddCt HTqPCR qPCR limma ddCt HTqPCR

12.2 years ago Heidi Dvinge ★ 2.0k

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1.5k

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ddCt HTqPCR ddCt HTqPCR

updated 12.8 years ago by Heidi Dvinge ★ 2.0k • written 12.8 years ago by marco fabbri ▴ 320

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2.2k

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convert ddCt convert ddCt

updated 12.9 years ago by james perkins ▴ 300 • written 12.9 years ago by Alnaji, Fadi ▴ 20

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1.3k

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Cancer ddCt cycle HTqPCR ASSIGN Cancer ddCt cycle HTqPCR ASSIGN

13.1 years ago Heidi Dvinge ★ 2.0k

14 results • Page 1 of 1

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Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k

I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…

Comment: Adjusted p-values become NA when sub-setting samples by txema.heredia • 0

Thanks! I've been looking into DESeq2's code and, indeed, I get matching results when running manually the code inherited from the `genefi…

Answer: DESeq2 interaction between cancer cells and microenvironment cells by Michael Love 42k

I don't really know what you mean by "come from the contamination". You can look at the main effects and the interaction, but I don't know …

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Fahd • 0

Thanks for looking into this. This issue results in the incorrect usage of multiple ORA software including EnrichR.

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k

Yes, I understand the implications of replacing the `OrgDb` packages in release. Maybe an upload to the annotationHub or GitHub could be an…

Votes

A: p.adjust BH generates duplicate values

Answer: Adjusted p-values become NA when sub-setting samples

Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice

Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim

A: How does edgeR cpm function calculate log(CPM) values?

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Popular Question to Mikhail Dozmorov ▴ 30