Showing : db0 • reset
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Spam: Ground Handling Companies in Maldives
alabaster.schemas db0
7 months ago vvipflight01 0
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Spam: GenOMICC DNA biobank
alabaster.schemas db0
8 months ago Jolka 0
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Join BOC Sciences at Drug Discovery Chemistry
alabaster.schemas db0
11 months ago bocsci11 • 0
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News: Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0 release Annotation
17 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release db0 Annotation
23 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release db0 annotation
2.4 years ago kayla.interdonato ▴ 160
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1.3k
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News: Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation release db0
2.9 years ago kayla.interdonato ▴ 160
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1.2k
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News: Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation release db0
3.8 years ago kayla.interdonato ▴ 160
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1
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1.3k
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
4.4 years ago kayla.interdonato ▴ 160
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980
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News: Bioconductor 3.11 db0s are available
annotation db0 news release News
4.9 years ago kayla.interdonato ▴ 160
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903
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News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
5.4 years ago kayla.interdonato ▴ 160
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1.2k
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ka
Annotation db0 Annotation db0
11.4 years ago Guest User ★ 13k
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2.4k
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problem with makeOrgPackageFromNCBI (for Chinese hamster)
Annotation GO db0 PROcess Annotation GO db0 PROcess
updated 11.5 years ago by ★ 7.2k • written 11.5 years ago by ★ 4.1k
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1.1k
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Add new affy organism platform
Microarray Annotation Organism cdf db0 probe annotate affy Microarray Annotation cdf
updated 11.8 years ago by ★ 7.2k • written 11.8 years ago by ▴ 50
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450K annotation: discrepancy between GEO GPL and Bioconductor annotation
Annotation db0 probe annotate PROcess GenomicFeatures GenomicRanges Annotation db0 probe
12.4 years ago Marc Carlson ★ 7.2k
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1.3k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 15.3 years ago by ★ 7.2k • written 15.3 years ago by ▴ 610
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building an annotation library from scratch
miRNA Annotation db0 AnnotationDbi miRNA Annotation db0 AnnotationDbi
15.4 years ago Guido Hooiveld ★ 4.1k
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2
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2.2k
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GO terms for E. coli micro arrays (ecoliK12.db generation)
Annotation GO Yeast db0 probe topGO AnnotationDbi Annotation GO Yeast db0 probe topGO
updated 15.7 years ago by ★ 7.2k • written 15.7 years ago by ▴ 20
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hyperGTest, different Results using different annotation packages
Microarray Annotation GO ChipName db0 GOstats Category Microarray Annotation GO ChipName
15.9 years ago Wiebke Iffert ▴ 20
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1
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1.3k
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memory corruption in make.cdf.package() reading binary CDF with BioC 2.3
cdf db0 cdf db0
updated 16.3 years ago by ★ 13k • written 16.3 years ago by ▴ 10
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1
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1.9k
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problem with AnnotationDbi
ChipName db0 affy Category AnnotationDbi ChipName db0 affy Category AnnotationDbi
updated 16.4 years ago by 16k • written 16.4 years ago by ▴ 830
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2
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1.6k
views
GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 16.5 years ago by ▴ 220 • written 16.5 years ago by ★ 7.2k
22 results • Page 1 of 1
Recent ...
Replies
Comment: how many significant figures are there in DESeq2 output by ATpoint ★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression by Jane • 0
why aren't there any answers?
Comment: Too many significant genes when integrating gtex and tcga by Jane • 0
I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
Comment: how many significant figures are there in DESeq2 output by Matthew McCormack ▴ 180
Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to by ATpoint ★ 4.7k
No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
Votes
A: Unbalanced experiment with multiple samples from each patient.
Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
Answer: GSVA Error Code "Calling gsva(expr=., gset.idx.list=., method=., ...) is defunct
Answer: Group-specific condition effects with individuals nested: matrix is not full ra
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