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Job: Research scientist in bioinformatics, Sweden
bioinformatics data analysis post doc Job
4.9 years ago mauno.vihinen • 0
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Job: Biostatistics Analyst (80-100%) at NEXUS Personalized Health Technologies, ETH Zurich, Switzerland
job biostatistics bioinformatics data analysis core facility Job
5.4 years ago Michael Prummer • 0
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Job: Post-doctoral Fellowship at BC Cancer Research Center, Vancouver BC
single cell RNA Data analysis Bioinformatics Job
5.5 years ago jmaanaki • 0
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Job: Postdoctoral Research position in the Genomics of Cerebral Palsy (University of Adelaide, Australia)
Cerebral Palsy bioinformatics data analysis Job
7.7 years ago gammyknee ▴ 10
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Where to find open access microbiome data for case-control comparative study?
microbiome data analysis data request
updated 7.7 years ago by ★ 13k • written 7.7 years ago by • 0
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Tutorial for RNA-Seq Data Analysis
rnaseq data analysis tutorial workflows differential gene expression
updated 7.7 years ago by ★ 28k • written 7.7 years ago by • 0
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New to mass spec data analysis
data analysis xcms Tutorial
updated 8 weeks ago by • 0 • written 7.7 years ago by • 0
7 results • Page 1 of 1
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Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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Popular Question to gabriel.hoffman ▴ 170
Popular Question to Jenny Drnevich ★ 2.0k
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Scholar to James W. MacDonald 67k
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