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News: News: Bioinformatics Summer School - July 2020 - UCLouvain (Belgium)
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4.9 years ago Laurent Gatto 1.6k
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.9 years ago mnchoi67 ▴ 40
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor training course msstats proteomics News
7.0 years ago mnchoi67 ▴ 40
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BioC happening in 2018?
BioC 2018 Course
7.4 years ago s.munster ▴ 40
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News: Advanced R programming course - EMBL Heidelberg, 3-4 April 2017
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7.9 years ago • updated 7.8 years ago Laurent Gatto 1.6k
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News: Workshop: microRNA Analysis Using Next-Generation Sequencing - From microRNA profiling and prediction to extensive downstream analyses
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8.5 years ago adele.feuerstein • 0
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News: Course: Analysis of RNA-seq and ChIP-seq data, March 29th - April 1st, Oeiras, Portugal
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8.8 years ago Mark Dunning ★ 1.1k
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News: Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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8.8 years ago Martin Morgan 25k
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News: Looking to attend to a Bioconductor course for biologists in Europe
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updated 9.6 years ago by ▴ 370 • written 9.6 years ago by ▴ 20
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News: 4 days left to register for a short course on computational proteomics
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9.8 years ago Olga Vitek ▴ 40
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News: Course Announcement: Use R / Bioconductor for Sequence Analysis (Intermediate Course)
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9.8 years ago Martin Morgan 25k
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News: An introductory course to RNA-seq 17-19 March 2015
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9.8 years ago rcaloger ▴ 500
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News: Course announcement: CSAMA 2015 (13th ed.) Statistics and Computing in Genome Data Science
Course News
9.9 years ago Wolfgang Huber ★ 13k
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News: Advanced Course: R programming and development 15-16. January 2015 (Thursday-Friday), EMBL Heidelberg
Course News
10.2 years ago • updated 10.1 years ago Wolfgang Huber ★ 13k
14 results • Page 1 of 1
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Comment: Cross-validation with multiple control subgroups in limma by Ali Barry ▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
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C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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