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conumee CopyNumberVariation MethylationAnalysis methylationArrayAnalysis EPICv2manifest

updated 5 weeks ago by James W. MacDonald 68k • written 5 weeks ago by luca.mangherini • 0

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218

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conumee CopyNumberVariation MethylationArrayData

6 weeks ago • updated 5 weeks ago Adam • 0

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696

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Conu conumee

updated 24 days ago by zpingfeng • 0 • written 9 months ago by idatta1 • 0

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conumee

updated 9 months ago by idatta1 • 0 • written 10 months ago by Maximus ▴ 10

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MethylationEPICv2.0 conumee

updated 4 months ago by fraober • 0 • written 2.1 years ago by luca.s ▴ 50

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IlluminaHumanMethylationEPICanno.ilm10b2.hg19 conumee

updated 3.7 years ago by James W. MacDonald 68k • written 3.7 years ago by diego.bardiaux • 0

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IlluminaHumanMethylationEPICmanifest minfi conumee

updated 3.9 years ago by volker hovestadt ▴ 40 • written 4.0 years ago by theresa.walder • 0

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conumee

4.0 years ago melpag • 0

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conumee CNV 450K

7.2 years ago bird.of.clockwise • 0

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4.8k

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conumee

updated 15 months ago by Mingkee • 0 • written 7.8 years ago by yura.grabovska ▴ 30

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Comment: Differential expression analysis using two TCGA datasets by ATpoint ★ 4.8k

If these are two different batches then they're fully confounded making it statistically invalid. Biologically, I find it at least question…

Comment: PhD scholar by ATpoint ★ 4.8k

Hi, please consider asking this at biostars.org as here we're mainly answering precise technical questions towards the packages. You are se…

Answer: how to use `arrayWeightsQuick()`? by Gordon Smyth 52k

Yes, that is the correct way to use `arrayWeightsQuick`. Thanks for pointing out that there is still a reference to `arrayWeightsSimple` i…

Answer: fast apply on RleList by story.benjamin ▴ 20

solved with viewApply (code is simplified below) + map reduce on chrs test.split <- split(test.gr,seqnames(test.gr)) final.st…

Comment: fast apply on RleList by story.benjamin ▴ 20

Hi James, thanks for the reply. I ultimately figured it out ... viewApply showed a massive speed increase for me (see other answer) - I was…

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Having Trouble Using CNE12() and CNE21() in CNEr

Answer: Having Trouble Using CNE12() and CNE21() in CNEr

annotation EpicV2

Answer: fast apply on RleList

Answer: BiocParallel_1.40.1.tar.gz not available

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Popular Question to Ariel Chernomoretz ▴ 170