Bioconductor Consensus

Showing : consensus • reset

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625

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blockwiseconsensusModules WGCNA consensus

21 months ago Levi • 0

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1.6k

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Network consensus sampledBlockwiseModules resampling WGCNA

updated 3.1 years ago by Peter Langfelder ★ 3.0k • written 3.1 years ago by Caleb Bostwick ▴ 30

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1.8k

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consensus BAM

updated 5.3 years ago by Hervé Pagès 16k • written 5.3 years ago by O. William McClung • 0

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1.4k

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DiffBind consensus

updated 5.7 years ago by Rory Stark ★ 5.2k • written 5.7 years ago by aviv.de-morgan • 0

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1.6k

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SC3 plot consensus marker heatmap

updated 6.2 years ago by Vladimir Kiselev ▴ 150 • written 6.2 years ago by shaktirielland • 0

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1.3k

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wgcna wgcna package consensus

6.4 years ago 2323982403 ▴ 60

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2.1k

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diffbind consensus

8.1 years ago pabla86 • 0

7 results • Page 1 of 1

Recent ...

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Comment: Differential variance analysis - can i use deseq2 by Michael Love 43k

VST is valid for working with expression data on a variance stabilized scale, so yes. There are many papers that have used VST and then com…

Answer: Use of limma R package with targeted proteomics for DE analysis by Gordon Smyth 52k

It is usual to analyse log normalized values from Olink in limma. Just a straight log transformation should be sufficient. We find that `tr…

Comment: WGCNA by pammelala304 • 0

Thank you for your time and effort. I am so grateful! Play game [block blast](https://blockblastpuzzle.io) free.

Comment: Does anyone have the command to download all of the core_nt using blast_db_get() by Matthew Thornton ▴ 380

Ok. So I guess the core_nt is over 300Gb compressed. I can do it, but maybe it is better to just use ncbi-tools over the internet and just…

Comment: normalizatino of dna methylation EPIC data by user_bioinfo • 0

yes actually that's why I did, and its all good! thank you for your response

Votes

Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu

Answer: normalizatino of dna methylation EPIC data

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

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Popular Question to Mark Dunning ★ 1.1k