Showing : consensus • reset
0
votes
0
replies
588
views
blockwiseConsensusModules won't save individualTOM data?
blockwiseconsensusModules WGCNA consensus
19 months ago Levi • 0
0
votes
1
reply
1.5k
views
WGCNA: Obtaining a consensus network from sampledBlockwiseModules function output
Network consensus sampledBlockwiseModules resampling WGCNA
updated 2.9 years ago by ★ 3.0k • written 3.0 years ago by ▴ 30
0
votes
1
reply
1.7k
views
Consensus sequence from BAM file
consensus BAM
updated 5.1 years ago by 16k • written 5.1 years ago by • 0
1
vote
2
replies
1.3k
views
DiffBind returns empty consensus peakset
DiffBind consensus
updated 5.5 years ago by ★ 5.2k • written 5.6 years ago by • 0
0
votes
1
reply
1.5k
views
SC3 how to customize plots ?
SC3 plot consensus marker heatmap
updated 6.0 years ago by ▴ 150 • written 6.1 years ago by • 0
0
votes
0
replies
1.3k
views
consensus module relationship
wgcna wgcna package consensus
6.2 years ago 2323982403 ▴ 60
0
votes
4
replies
2.0k
views
consensus analysis and dba.count function
diffbind consensus
7.9 years ago pabla86 • 0
7 results • Page 1 of 1
Recent ...
Replies
Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0
Thanks for your reply!
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
Awards • All
Popular Question to Ali Barry ▴ 40
Popular Question to gabriel.hoffman ▴ 170
Popular Question to Jenny Drnevich ★ 2.0k
Popular Question to martin.grigorov ▴ 10
Scholar to James W. MacDonald 67k
Locations • All
EMBL Heidelberg, 52 minutes ago
United States, 1 hour ago
France, 2 hours ago
United Kingdom, 2 hours ago
WEHI, Melbourne, Australia, 5 hours ago
Traffic: 464 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6