Bioconductor ComputeFeatures.haralick

Showing : computeFeatures.haralick • reset

1

vote

1

reply

2.0k

views

haralick computeFeatures EBImage computeFeatures.haralick

updated 8.1 years ago by Bernd Fischer ▴ 550 • written 8.1 years ago by jenesaispas1990 • 0

1 result • Page 1 of 1

Recent ...

Replies

Comment: How can I generate a heatmap and clustering of differentially expressed genes in by Renuka • 0

Thanks Kelvin i had same doubt .Do i need to do log2 (FPKMcounts) for this

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0

Michael, Thank you very much!

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k

Yes, with the knowledge that, it is expected to be underpowered.

Comment: Is there a way to do DEG analysis across two batches sharing one sample only? by georgeyu703 • 0

Thank you, Michael. How? Could you provide more details? Can I just do it as usual, I mean to include batch in the model?

Answer: Is there a way to do DEG analysis across two batches sharing one sample only? by Michael Love 43k

The short answer is yes, you can use even a single sample to estimate the batch effect (and therefore control for it in otherwise confounde…

Votes

Answer: EdgeR Biological CVs

Awards • All