Bioconductor Cnvtools

Showing : cnvtools • reset

votes

replies

1.0k

views

genomicranges cnvtools

7.1 years ago julrodr80 ▴ 30

votes

replies

1.4k

views

cnv cnvtools crlmm

8.3 years ago enriquev • 0

votes

1.8k

views

copynumber cnvtools cnv copywriteR

updated 8.3 years ago by t.kuilman ▴ 170 • written 8.3 years ago by ahinsahr11 • 0

votes

replies

2.1k

views

cn.mops cnvtools tcga cnv

updated 9.1 years ago by Günter Klambauer ▴ 540 • written 9.1 years ago by vakul.mohanty ▴ 20

votes

replies

1.9k

views

cn.mops cnv cnvtools

updated 9.4 years ago by Günter Klambauer ▴ 540 • written 9.4 years ago by voksdvoks • 0

votes

replies

2.6k

views

cn.mops cnv cnvtools

updated 9.4 years ago by Martin Morgan 25k • written 9.4 years ago by bioconductor • 0

votes

1.0k

views

CNVtools CNVtools

updated 14.8 years ago by Sean Davis 21k • written 14.8 years ago by Bryan Hepworth ▴ 30

votes

replies

958

views

CNVtools CNVtools

15.0 years ago Vincent Plagnol ▴ 10

8 results • Page 1 of 1

Recent ...

Replies

Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k

Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…

Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0

Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k

You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…

Answer: HilBertVis install error by James W. MacDonald 67k

It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…

Comment: Identical samples after deseq2 batch effect removal by maripane • 0

Thanks Michael for quick reply. Actually, I also questioned this but later i saw this issue happens within another cluster and different c…

Votes

A: TopGO: How to retrieve the gene list related to a GO ID ?

A: Error in DESeqDataSet : some values in assay are not integers

A: correcting the batch effects in Limma and SVA

A: Using of limma moderated t-test with "corrected" expression matrix resulting fr

Awards • All

Popular Question to alexandre.blais ▴ 50