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clariom
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Aligning Clariom D against reference Genome and transcriptome pipeline
Clariom
Align
MicroarrayData
Alignment
Microarray
16 months ago
jsharif
• 0
1
vote
5
replies
1.3k
views
Correct annotation R package for human clariom array analysis
clariom
oligo
affycoretools
pd.hugene.2.0.st
updated 5.3 years ago by
James W. MacDonald
66k • written 5.3 years ago by
svlachavas
▴ 830
1
vote
3
replies
891
views
Selecting probe data from Clariom D assays using the fid probe tags
clariom
pd.clariom.d.human
updated 5.7 years ago by
James W. MacDonald
66k • written 5.7 years ago by
AliStair Rust
• 0
1
vote
1
reply
1.0k
views
RNA degradation plot for Clariom S and Clariom D
Rna degradation
Clariom
updated 6.3 years ago by
James W. MacDonald
66k • written 6.3 years ago by
kritikamish99
▴ 10
2
votes
4
replies
2.3k
views
affycoretools annotateEset problem using Clariom D arrays
affycoretools
clariom
updated 6.8 years ago by
James W. MacDonald
66k • written 6.8 years ago by
willj
▴ 30
2
votes
2
replies
1.1k
views
paCalls with Clariom Chips
oligo
microarray
clariom
updated 7.0 years ago by
James W. MacDonald
66k • written 7.0 years ago by
kmvaldez2
• 0
0
votes
0
replies
812
views
genefu and clariom d
clariom
genefu
7.0 years ago
info
• 0
7 results • Page
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Comment: limma comparison for small sample size and how to get covariance matrix
by
Gordon Smyth
51k
Your MDS plot is better than before, but you are still not following the recommendation for making for making such plots given in the limma…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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