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chemminer
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327
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Comparing compounds in CheminneR
Cheminformatics
ChemmineR
ChemmineDrugs
10 months ago
Sean
• 0
0
votes
1
reply
875
views
ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf
ChemmineOB
Cheminformatics
ChemmineR
2.9 years ago
adelenelai
• 0
0
votes
0
replies
1.4k
views
How to combined multiple *.mol files into a single *.sdf file using ChemmineR?
ChemmineR
Chemmin
ChemmineOB
3.1 years ago
sukissqz
• 0
3
votes
4
replies
1.4k
views
Error in ChemmineR function propOB() and ChemmineOB prop_OB()
ChemmineR
ChemmineOB
updated 3.4 years ago by
Thomas Girke
★ 1.7k • written 3.6 years ago by
teresadijor
• 0
2
votes
6
replies
1.2k
views
How to remove HCL mols in Chemminer
ChemmineR
Chemistry
updated 5.3 years ago by
khoran
▴ 10 • written 5.3 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
958
views
Bioactivity assay DBs for cheminfo packages
bioassayR
ChemmineR
PubChem
updated 5.3 years ago by
Thomas Girke
★ 1.7k • written 5.3 years ago by
Anthony Nash
▴ 20
1
vote
1
reply
935
views
Where can I locate the bioassayR database?
bioassayr
chemmineR
cheminformatics
5.3 years ago
Anthony Nash
▴ 20
1
vote
4
replies
2.2k
views
How do I convert kegg info on drug to a format allowing me to calculate similarities?
keggrest
chemminer
fmcsr
graph
written 6.3 years ago by
Joris.Meys
• 0
0
votes
0
replies
870
views
Downloading 3D compounds from Pubchem in ChemmineR
chemminer
6.7 years ago
jubilantsundar
• 0
1
vote
2
replies
1.5k
views
drawing chemical from smile 2D/3D
chemminer
updated 7.0 years ago by
Thomas Girke
★ 1.7k • written 7.0 years ago by
Stane
▴ 40
0
votes
0
replies
995
views
Tversky' alpha and beta should not be int, should they?
ChemmineR
7.3 years ago
stephan.struckmann
• 0
0
votes
2
replies
1.5k
views
output of propOB function ChemmineR
ChemmineR
ChemmineOB
ChemmineTools
Drug
7.4 years ago
elisa.micarelli
▴ 10
0
votes
1
reply
2.1k
views
ChemmineR package - fpSim and cmp.similarity - Tanimoto kernels
ChemmineR
updated 8.2 years ago by
Thomas Girke
★ 1.7k • written 8.2 years ago by
ረ
• 0
0
votes
0
replies
1.2k
views
MCS & ChemineR
Network
Clustering
PROcess
ChemmineR
Network
Clustering
PROcess
ChemmineR
11.3 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.2k
views
ChemmineR Help
Clustering
ChemmineR
Clustering
ChemmineR
11.6 years ago
Thomas Girke
★ 1.7k
15 results • Page
1 of 1
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Comment: Ranking the GSEA Results
by
Lluís Revilla Sancho
▴ 730
You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…
Answer: Create a Graph w/ Only the Genes Interaction
by
Antonio
• 0
Thank you all, I solved my issue by creating a for loop. Cheers!
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself
Comment: Ranking the GSEA Results
by
alserg
▴ 270
Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…
Comment: Trouble Installing DADA2 (warning: R new user)
by
shepherl
3.9k
As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…
Votes
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features
Comment: How to get the DMR?
Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it
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