Bioconductor ChemmineR

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Cheminformatics ChemmineR ChemmineDrugs

17 months ago Sean • 0

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cheminf ChemmineOB Cheminformatics ChemmineR

3.5 years ago adelenelai • 0

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ChemmineR Chemmin ChemmineOB

3.7 years ago sukissqz • 0

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ChemmineR ChemmineOB

updated 4.0 years ago by Thomas Girke ★ 1.7k • written 4.1 years ago by teresadijor • 0

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ChemmineR Chemistry

updated 5.8 years ago by khoran ▴ 10 • written 5.9 years ago by Anthony Nash ▴ 20

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bioassayR ChemmineR PubChem

updated 5.9 years ago by Thomas Girke ★ 1.7k • written 5.9 years ago by Anthony Nash ▴ 20

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bioassayr chemmineR cheminformatics

5.9 years ago Anthony Nash ▴ 20

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keggrest chemminer fmcsr graph

written 6.9 years ago by Joris.Meys • 0

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chemminer

7.3 years ago jubilantsundar • 0

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chemminer

updated 7.6 years ago by Thomas Girke ★ 1.7k • written 7.6 years ago by Stane ▴ 40

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ChemmineR

7.9 years ago stephan.struckmann • 0

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ChemmineR ChemmineOB ChemmineTools Drug

7.9 years ago elisa.micarelli ▴ 10

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ChemmineR

updated 8.8 years ago by Thomas Girke ★ 1.7k • written 8.8 years ago by ረ • 0

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Network Clustering PROcess ChemmineR Network Clustering PROcess ChemmineR

11.9 years ago Thomas Girke ★ 1.7k

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Clustering ChemmineR Clustering ChemmineR

12.2 years ago Thomas Girke ★ 1.7k

15 results • Page 1 of 1

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Answer: Selection of correct coefficients or contrasts in DESeq2 by swbarnes2 ★ 1.4k

I think you need to include the design you used, and the command you used to call it. The simplest answer is that your two ways of doing t…

Comment: Csaw normalization strategies - general inquiry by Luca • 0

Hello Aaron, About the IP efficiencies, yes definitely and for us, to complicate this experiment further, these batches were generated by …

Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by Quang NN ▴ 10

Thank you ATpoint for your response. In bulkRNAseq, I did have two cell types to compare. But, I want to also see if bulkRNAseq might have …

Answer: Why select top highly expressed genes based on normalized counts, but then plot by ATpoint ★ 4.6k

The choice of variable genes is typically part of a QC process. You select genes that in an unbiased fashion (unbiased because variance cal…

Comment: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by ATpoint ★ 4.6k

My take is that RNA-seq (be it bulk or single-cell) is inherently relative. I don't think you can really "compare" the absolute expression …

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Answer: Csaw normalization strategies - general inquiry

A: DESeq2 interaction term

Comment: Recount3 data correspond to TCGA data

Answer: DESeq2- merging technical vs biological replicates

Answer: SingleCellExperiment convenience function for metadata+expression?

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