updated 2.2 years ago by
hw538
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written 2.2 years ago by
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In addition to Mike's comment, do note that if you are generating a heatmap based on the set of significant genes, the direction of your co…
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You shouldn't be using beta values for a linear model that assumes a unimodal, untruncated distribution (beta values are strictly on (0-1) …
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Robert Castelo
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So, if I understand correctly, you derived GSVA scores from gene sets corresponding somehow to drugs in your RNA-seq data. Since GSVA score…
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> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively?
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Gordon Smyth
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You need to clarify whether interactions are present for the two factors in your study.
In the two factors do not interact, then the code y…
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