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brainarray
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reset
2
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4
replies
1.7k
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rma summarization error when normalizing using oligo and brainarray cdf
oligo
brainarray
mbni
5.5 years ago
Moosa
• 0
0
votes
5
replies
2.1k
views
Annotating Expression Set for GSVA w/ Brainarray Human Gene 1.1 ST Array CDF
bioconductor
brainarray
genefilter
oligo
updated 6.5 years ago by
James W. MacDonald
67k • written 6.6 years ago by
kdyson
• 0
4
votes
3
replies
1.3k
views
How to set custom Brainarray annotation for Biobase ExpressionSet object?
affymetrix microarrays
expressionset
biobase
annotation
brainarray
updated 7.5 years ago by
James W. MacDonald
67k • written 7.5 years ago by
lykhenko.olexandr
• 0
2
votes
1
reply
1.8k
views
BrainArray Custom CDFs and oligo
oligo
brainarray
rma
customcdf
updated 7.9 years ago by
James W. MacDonald
67k • written 7.9 years ago by
lcordeiro
• 0
0
votes
3
replies
1.7k
views
UPC and Sequence file to remove GC bias
UPC_Generic_ExpressionSet
brainarray
updated 9.7 years ago by
Stephen Piccolo
▴ 600 • written 9.7 years ago by
sanj
▴ 20
5 results • Page
1 of 1
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Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
freemanmclaughlin9969289
• 0
Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Comment: How to get around the warning message: mzR has been built against a different Rc
by
Nan
• 0
Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…
Answer: EuroBioC2023 abstract submission closing soon!
by
excess.gecko.shso
• 0
Don't miss out! EuroBioC2023 abstract submissions are nearing the deadline. Sharpen your scientific [Wordle Game][1] skills and submit your…
Answer: EuroBioC2024 abstract submission is open!
by
excess.gecko.shso
• 0
EuroBioC2024 abstract submissions are now open! Join the Oxford conference from Sep 4-6. Submit your abstract by April 26 for short talks, …
Comment: Cross-validation with multiple control subgroups in limma
by
Ali Barry
▴ 40
Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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Ali Barry
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gabriel.hoffman
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Jenny Drnevich
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