Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
bootstrap
•
reset
1
vote
3
replies
1.9k
views
Two Genotypes Four Treatments RNA-seq Analysis
salmon
rna-seq
swish
bootstrap
fishpond
updated 3.2 years ago by
Michael Love
43k • written 3.2 years ago by
samuelcjx
• 0
0
votes
6
replies
1.5k
views
tximport lose transcript names with Salmon bootstrap
salmon
tximport
bootstrap
updated 5.1 years ago by
julia.jefferson23
• 0 • written 5.1 years ago by
Cindy
• 0
0
votes
0
replies
1.2k
views
Using log2FC distance matrix in Boot.Phylo to create bootstrapped trees
tree
bootstrap
dgelist
plotmds
7.1 years ago
Larry K.
• 0
0
votes
0
replies
1.0k
views
Jackknifing/bootstrapping input and output question
jackknifing
R
microarray
bootstrap
7.8 years ago
bhgyu
▴ 30
1
vote
7
replies
1.9k
views
[GSVM] bootstrapping error
GSVM
bootstrap
snow
updated 8.2 years ago by
Robert Castelo
★ 3.4k • written 8.2 years ago by
mforde84
▴ 20
0
votes
1
reply
4.2k
views
ape - delete bootstrap values (node.labels) less than a certain value
ape
bootstrap
node
phylogenetic
tree
9.8 years ago
wd
▴ 30
0
votes
1
reply
1.9k
views
DESeq2 -- Bootstrap subsampling to estimate distribution of expression
deseq2
bootstrap
differential expression
updated 10.1 years ago by
Michael Love
43k • written 10.1 years ago by
David Eccles (gringer)
▴ 30
7 results • Page
1 of 1
Recent ...
Replies
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
Perhaps edgeR's upperquartile normalization handles this better, the MA looks a lot more centered at 0 ![enter image description here][1]…
Answer: DESeq2 - am I extracting results incorrectly?
by
James W. MacDonald
68k
If I assume that Followup gets converted to T3 and Treatment to LowSug somewhere along the line (and therefore GroupTreatment.Followup is G…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
I noticed the dual populations as well, when using csaw this is controlled for. Regarding the DE profile, given this disease condition we e…
Answer: Origin of the labels for the SingleCellMultiModal dataset
by
ATpoint
★ 4.8k
If you check the underlying code a bit you find that there is a file with data sources: ```r modes_file <- system.file("extdata", "metadat…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
ATpoint
★ 4.8k
That plot looks extremely worrying. You have very unbalanced DE profiles and clearly two populations of peaks on the right. I would make su…
Votes
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
Comment: DESeq - help with pair wise comparisons
Answer: Is random access by row index possible for an indexed VCF file?
Answer: Is random access by row index possible for an indexed VCF file?
Answer: SingleR with multiple single cell references
Awards
• All
Popular Question
to
pcantalupo
▴ 10
Popular Question
to
bioinformaticssrm2011
• 0
Popular Question
to
slizchap
• 0
Scholar
to
Aaron Lun
★ 28k
Scholar
to
James W. MacDonald
68k
Locations
• All
Canada,
4 minutes ago
United Kingdom,
26 minutes ago
United States,
38 minutes ago
Switzerland,
52 minutes ago
United Kingdom,
1 hour ago
Traffic: 641 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6