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bed files
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0
votes
7
replies
2.3k
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Compute average score across multiple bed files
chip-seq
granges
R
bed files
updated 5.9 years ago by
spotifywebplayer
• 0 • written 5.9 years ago by
jinseok
• 0
0
votes
0
replies
1.0k
views
I need to measure distance of PAR-CLIP data to RNA regions
parclip
bedtools
bed files
gff3
6.5 years ago
linuxborg2
• 0
1
vote
1
reply
1.6k
views
Filtering a BED file according to genomic annotation
bed files
bedtools
filtering
chipseq
updated 6.5 years ago by
Aaron Lun
★ 28k • written 6.5 years ago by
rbronste
▴ 60
0
votes
1
reply
1.1k
views
getReadCountsFromBAM including bed information
cn.mops
bed files
getReadCountsFromBAM
7.0 years ago
Pau Marc Muñoz Torres
▴ 20
0
votes
1
reply
1.0k
views
Bioconductor RNA-seq bed file read-in/download then wavelet transform
bed files
wavelet
rna-seq
updated 7.2 years ago by
shepherl
3.9k • written 7.2 years ago by
whgsnp
• 0
0
votes
1
reply
1.3k
views
How to extract non-overlapping genes from a a bed file?
gene density
bed files
gff
7.9 years ago
birdguy.saikat
• 0
2
votes
3
replies
2.4k
views
import.bed fails on bed file with no scores
rtracklayer
import
bed files
8.2 years ago
jmr
• 0
0
votes
0
replies
1.0k
views
customproDB: gene fusions
fusion
bed files
gene fusion
bed file
8.3 years ago
ramaniak
• 0
8 results • Page
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Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Also, ``` > result <- mapUniProt( from = "EMBL-GenBank-DDBJ_CDS", to = "UniProtKB", query = c("ACF95883.1") ) > result From…
Comment: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
Ugh, here's the link https://www.uniprot.org/id-mapping/uniprotkb/dd08aa16774d98ef087dc3bd708582012bba49e2/overview?fields=accession%2Cre…
Answer: Mapping Between GenBank ID's and Uniprot
by
James W. MacDonald
66k
The input should be 'EMBL-GenBank-DDBJ_CDS", as that is a GenBank ID.
Answer: XCMS2 of orbitrap data
by
Elodie
• 0
Hi, I have the same question, I have acquired MS2 data with PRM analysis and inclusion lists of several ions. I have a list of product ion…
Answer: unreal negative log2fc values
by
ATpoint
★ 4.2k
I don't see why this is unrealistic. A logFC of -10 is about -1000 on normal scale. The rough difference between the mean of these counts p…
Votes
Answer: EPIC array hg38 annotation?
Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: Ranking the GSEA Results
Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
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