Bioconductor Basemean

Showing : basemean • reset

votes

608

views

DESeq2 diferentialabundance 16srRNA baseMean

updated 19 months ago by Michael Love 43k • written 19 months ago by PhD_student_microbiome • 0

vote

replies

5.2k

views

basemean DESeq2

updated 2.2 years ago by ATpoint ★ 4.5k • written 2.6 years ago by msellabenton • 0

votes

replies

8.7k

views

deseq2 baseMean differential gene expression rnaseqgene

updated 5.8 years ago by swbarnes2 ★ 1.4k • written 5.8 years ago by melkile26 • 0

votes

replies

2.2k

views

deseq2 diffbind basemean summarizedexperiment

6.3 years ago rbronste ▴ 60

votes

1.0k

views

deseq results baseMean

updated 6.4 years ago by Michael Love 43k • written 6.4 years ago by batmaiden • 0

votes

1.5k

views

deseq2 baseMean cooks distance

updated 6.8 years ago by Michael Love 43k • written 6.8 years ago by da.de ▴ 30

6 results • Page 1 of 1

Recent ...

Replies

Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

Awards • All