Bioconductor Arrays

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765

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illuminaHumanv3.db arrays

23 months ago DH • 0

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927

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limma arrays genefilter

updated 2.8 years ago by James W. MacDonald 68k • written 2.8 years ago by jacorvar ▴ 40

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2.2k

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Microarray arrays limma MicroarrayData

updated 3.8 years ago by Gordon Smyth 52k • written 3.9 years ago by Emma • 0

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1.9k

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limma Microarray MicroarrayData arrays

updated 4.0 years ago by Kevin Blighe ★ 4.0k • written 4.0 years ago by Emma • 0

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1.4k

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ArrayExpress limma arrays

4.0 years ago RMP87 • 0

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2.6k

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minfiDataEPIC arrays limma minfi Epigenetics

updated 4.4 years ago by Gordon Smyth 52k • written 4.4 years ago by Jeff ▴ 20

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3.6k

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array R rhdf5 arrays h5

updated 10.2 years ago by Nathaniel Hayden ▴ 180 • written 10.2 years ago by FabioF • 0

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Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0

Thank you so much for your reply.

Comment: Analyzing TnSeq data with DESeq2 by Tom • 0

[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…

Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

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