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Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
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ATpoint
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Yes, perfectly valid. Analyzing counts from high-throughput experiments with DESeq2 (or edgeR, or limma) is standard. After all, what DiffB…
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Force=TRUE did the trick. Thank you.
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[https://github.com/djunsheep/CRANextra/blob/main/README.md][1]
add the following to the `.Rprofile` and `Rprofile.site`
# fixing the…
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riboWalze is not a Bioconductor package and does not appear to be a Bioconductor function; the maintainer is not guaranteed to be on this …
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What is your `sessionInfo()`? I just tried locally and it works fine so there might have been a bad or interrupted download when initially…
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