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annotatr
•
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0
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345
views
Annotatr Duplicate Entries
annotatr
AnnotationHub
8 months ago
hayleyw
• 0
0
votes
0
replies
326
views
annotatr rn7?
annotatr
8 months ago
chuanjiao6
• 0
0
votes
1
reply
1.3k
views
sampling random regions of same nucleotide composition from hg38 genome
annotatr
regioneR
gkmSVM
updated 10 months ago by
Mahmoud
• 0 • written 3.8 years ago by
rohitsatyam102
▴ 20
0
votes
1
reply
682
views
custom annotations with annotatr
annotatr
17 months ago
luca.s
▴ 50
0
votes
1
reply
1.0k
views
Problem with annotations using annotatr
annotatr
2.2 years ago
eric.rhoncalderon
• 0
0
votes
0
replies
822
views
Is it possible to output ensembl id for annotatr build_annotations basicgenes?
Annotation
annotatr
2.8 years ago
Ahdee
▴ 50
0
votes
0
replies
924
views
annotatr with custom TxDb
GenomicFeatures
annotatr
genomicFe
3.4 years ago
António Miguel de Jesus Domingues
▴ 510
0
votes
0
replies
990
views
annotatr package: GRanges object contains out-of-bound ranges
annotatr
GenomicRanges
3.9 years ago
Nala
• 0
3
votes
4
replies
1.7k
views
Can't install packages on R or via Bioconductor
R
installation
packages
annotatr
biocmanager
4.5 years ago
dakarai_esgdaille
▴ 10
1
vote
1
reply
1.6k
views
annotatr: CpG Island/Shore/Shelf IDs
annotatr
updated 5.8 years ago by
rcavalca
▴ 140 • written 5.8 years ago by
sorjuelal
• 0
0
votes
3
replies
1.5k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 6.0 years ago by
rcavalca
▴ 140 • written 6.0 years ago by
soli5
• 0
0
votes
1
reply
1.0k
views
ENSEMBL database for annotatr
annotatr
updated 6.6 years ago by
rcavalca
▴ 140 • written 6.6 years ago by
xie186
• 0
2
votes
2
replies
1.2k
views
Unexpected results from annotatr
annotatr
updated 6.6 years ago by
rcavalca
▴ 140 • written 6.6 years ago by
xie186
• 0
2
votes
2
replies
1.1k
views
'fill_order' in annotatr
annotatr
updated 6.6 years ago by
rcavalca
▴ 140 • written 6.6 years ago by
xie186
• 0
1
vote
3
replies
1.6k
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 6.6 years ago by
rcavalca
▴ 140 • written 6.6 years ago by
xie186
• 0
0
votes
3
replies
1.2k
views
find intersections of genomic regions with built-in genomic annotations for S.Cerevisiae
annotatr
7.6 years ago
vivianengoune
• 0
0
votes
2
replies
1.8k
views
annotatr GRanges Error
annotatr
updated 7.6 years ago by
rcavalca
▴ 140 • written 7.6 years ago by
cguzman.roma
• 0
4
votes
2
replies
1.3k
views
Annotatr package not loading certain features
annotatr
updated 7.9 years ago by
Valerie Obenchain
★ 6.8k • written 7.9 years ago by
divyswar01
• 0
18 results • Page
1 of 1
Recent ...
Replies
Comment: How should I run ssGSEA Hallmark Enrichment Analysis?
by
Ginny
• 0
I think the other side of this question is that the non protein coding genes would be in the "background", they would influence the ranking…
Comment: ISO a solution to rank-order introns by transcript
by
James W. MacDonald
67k
There's an error in the last line. Note that `sapply(lengths(z), seq_len)` will return a `list` because the lengths vary. We need a vector,…
Comment: BiomaRt - improved access to Ensembl ?
by
Mike Smith
★ 6.5k
Why do you want to use `useMart()` rather than `useEnsembl()`? They are essentially the same (`useEnsembl()` will eventually call `useMart(…
Comment: Installing Bioconductor packages in Docker
by
devarti.mahakalkar
• 0
I have installed BiocManager on my base image rather than having it as base image. RUN Rscript -e "install.packages('BiocManager', re…
Comment: Meta-analysis on RNA-seq data sets
by
Travis
• 0
Thank you for your suggestions and explanation of your approach!
Votes
Answer: ISO a solution to rank-order introns by transcript
Answer: ISO a solution to rank-order introns by transcript
Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c
Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c
Answer: addPatternDensity in 'qsea' takes too much time
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Robert Castelo
★ 3.4k
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James W. MacDonald
67k
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to
mat149
▴ 80
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Gordon Smyth
51k
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Kevin
• 0
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