Bioconductor Altcdfenvs

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affymetrix microarrays frmatools altcdfenvs

updated 7.2 years ago by Matthew McCall ▴ 830 • written 7.2 years ago by osieman52 • 0

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cdf probe affy altcdfenvs cdf probe affy altcdfenvs

updated 13.8 years ago by James W. MacDonald 68k • written 13.8 years ago by Ariel Grostern ▴ 80

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cdf probe affy altcdfenvs cdf probe affy altcdfenvs

13.8 years ago Ariel Grostern ▴ 80

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cdf probe affy altcdfenvs cdf probe affy altcdfenvs

13.9 years ago Ariel Grostern ▴ 80

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probe altcdfenvs probe altcdfenvs

updated 14.5 years ago by Laurent Gautier ★ 2.3k • written 14.5 years ago by Jack Luo ▴ 440

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cdf probe altcdfenvs cdf probe altcdfenvs

19.0 years ago michael driscoll ▴ 30

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probe affy makecdfenv matchprobes altcdfenvs probe affy makecdfenv matchprobes altcdfenvs

updated 19.5 years ago by lgautier@altern.org ▴ 950 • written 19.5 years ago by Norman Pavelka ▴ 190

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altcdfenvs altcdfenvs

updated 19.5 years ago by lgautier@altern.org ▴ 950 • written 19.5 years ago by Nicholas Lewin-Koh ▴ 430

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cdf affy altcdfenvs cdf affy altcdfenvs

updated 19.7 years ago by Sean Davis 21k • written 19.7 years ago by Rifat Hamoudi ▴ 30

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probe affy altcdfenvs probe affy altcdfenvs

19.8 years ago Mette Langaas ▴ 10

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cdf probe altcdfenvs cdf probe altcdfenvs

20.1 years ago Wu, Xiwei ▴ 350

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GO cdf PROcess altcdfenvs GO cdf PROcess altcdfenvs

20.8 years ago Lana Schaffer ▴ 80

12 results • Page 1 of 1

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Comment: Cannot extract size factor from DESeq2 analysis by s.malik • 0

Dear Mike, using tximeta and following code, is this fine to extract normalized counts after `sizeFactors(dds)` gives NULL? `dds <- DESeq…

Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0

Thank you so much for your reply.

Comment: Analyzing TnSeq data with DESeq2 by Tom • 0

[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…

Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

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Comment: Filtering after DESeq

A: Normalized counts from DESeq2 results in similar but not equal total read count?

A: DESeq2: Different Dispersions for different sample groups

A: Contrasts & coefficients in limma

Answer: How to formulate 2 factor nested design in DESeq2

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