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Showing :
Xvector
•
reset
0
votes
3
replies
917
views
Extracting values from out-of-bounds Rle Views
IRanges
XVector
AtomicList
written 2.8 years ago by
Pierre-Luc Germain
▴ 20
5
votes
4
replies
4.5k
views
XVector installation fails because zlib.h is not found
XVector
docker
Install
3.3 years ago
RobKo
▴ 10
2
votes
1
reply
898
views
is check=FALSE safe in compact()?
XVector
updated 4.1 years ago by
Martin Morgan
25k • written 4.1 years ago by
robmaz77
▴ 20
2
votes
2
replies
2.5k
views
Error in installation of scran
S4Vectors
IRanges
XVector
GenomicRanges
scran
updated 6.2 years ago by
Aaron Lun
★ 28k • written 6.2 years ago by
Momo
• 0
0
votes
15
replies
2.6k
views
Looking for the source for IRanges 2.8.1, S4Vectors 0.12.1 and XVector 0.14.0
bioconductor
iranges
s4vectors
xvector
r 3.3.2
updated 6.6 years ago by
becker.gabriel
▴ 10 • written 6.6 years ago by
chokoiboko
• 0
0
votes
2
replies
1.5k
views
VariantAnnotation::locateVariants error coming from XVector
variantannotation
xvector
iranges
6.8 years ago
Vivek.b
▴ 100
2
votes
5
replies
5.2k
views
How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq
Xvector
dnastringset
updated 7.8 years ago by
Hervé Pagès
16k • written 7.8 years ago by
Sophie
• 0
0
votes
0
replies
1.0k
views
Suggestion for a regression test in XVector
xvector
7.9 years ago
Charles Plessy
▴ 180
0
votes
5
replies
2.5k
views
Problem installing XVector package
software error
gcrma
Xvector
iranges
8.6 years ago • updated 8.5 years ago
gary_smith
• 0
0
votes
0
replies
1.3k
views
回复: XVector
Network
Cancer
IRanges
XVector
10.5 years ago
Hervé Pagès
16k
0
votes
0
replies
1.5k
views
XVector
Cancer
XVector
10.5 years ago
Hervé Pagès
16k
0
votes
7
replies
2.5k
views
VariantTools installation problem: dependencies not available
IRanges
GenomicRanges
VariantTools
XVector
IRanges
GenomicRanges
VariantTools
XVector
updated 11.3 years ago by
Michael Lawrence
★ 11k • written 11.3 years ago by
heyi xiao
▴ 360
1
vote
6
replies
5.2k
views
ERROR: compilation failed for package XVector
XVector
XVector
updated 11.6 years ago by
Hervé Pagès
16k • written 11.6 years ago by
Pengcheng Yang
▴ 60
13 results • Page
1 of 1
Recent ...
Replies
Comment: Error in retrieving clinical data
by
silickas
• 0
Thank you for the reply. I will try to do that next time. This time instead, I used the GenomicDataCommons package to download clinical dat…
Comment: deseq2 lfc shrinkage with few DEGs
by
Robert
• 0
I'm dealing with a similar situation. I assume the coefficients related to batch effect would need to be included in idx also, is this corr…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
Thank you so much!! Yeah I had thought about this too, regarding the fact that DiffBind is a wrapper for counting peaks in this way in R di…
Comment: DESeq2 testing ratio of ratios (RIP-Seq, CLIP-Seq, ribosomal profiling)
by
aitor
• 0
Hi everyone. I have a RIP-Seq analysis with 3 conditions and 3 assays (IP, IgG and Input for each of them). 4 replicates for each conditio…
Comment: Discrepancy between Excel TPP-TR reported values and the Melt Curve reported val
by
James W. MacDonald
68k
You will need to provide a self-contained example, or it is unlikely that anybody could debug any possible issue.
Votes
Answer: Limma - Complex 2-way multi-level contrast with paired samples
Answer: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
Help with creation of an OrgDB package and conduction of a bioinformatical analysis of gene expression
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Answer: Differential expression of proteins using somascan data
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