Showing : WGCNA package • reset
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WGCNA trait order in heat map
wgcna WGCNA wgcna package
4.8 years ago coyoung ▴ 10
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2
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3.2k
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Module preservation WGCNA
wgcna wgcna package modulepreservation
updated 5.9 years ago by ★ 3.0k • written 5.9 years ago by ▴ 40
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2.1k
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WGCNA: Matching eigengenes to samples
wgcna wgcna package
5.9 years ago Jack • 0
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2
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1.4k
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Using Kendall's Tau rank correlation coefficient for creating WGCNA network
wgcna package wgcna
6.0 years ago anni.djurhuus • 0
2
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3
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1.7k
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Problem for finding "Locus Link ID" from Annotation file
wgcna package TCGA LocusLinkID genecode ensembl
updated 6.1 years ago by 67k • written 6.1 years ago by ▴ 10
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2
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3.6k
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TOMplot error: "color" is not a graphical parameter (WGCNA)
wgcna package software error
updated 6.1 years ago by ★ 3.0k • written 6.1 years ago by • 0
0
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0
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1.2k
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consensus module relationship
wgcna wgcna package consensus
6.1 years ago 2323982403 ▴ 60
2
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4
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1.8k
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Segfault error when loading WGCNA
wgcna wgcna package
6.2 years ago antoinefelden ▴ 10
2
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2
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5.5k
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WGCNA extract genes from a module
WGCNA wgcna package
updated 6.2 years ago by ★ 3.0k • written 6.2 years ago by ▴ 10
1
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3
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1.5k
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SampleNetwork in WGCNA
wgcna wgcna package
6.3 years ago 2323982403 ▴ 60
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2.7k
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Use of bicor in WGCNA
WGCNA wgcna package wgcna bicor
6.3 years ago bekah ▴ 40
12
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15
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18k
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WGCNA: Understanding module-trait correlations
wgcna package
updated 6.3 years ago by ★ 3.0k • written 6.3 years ago by ▴ 40
0
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0
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1.0k
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problem for finding soft power for constructing network in WGCNA algorithm
RNA-seq WGCNA package soft power
6.3 years ago modarzi ▴ 10
13 results • Page 1 of 1
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Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
Hi Robert, Thank you for the explanation, But I am still little bit confused, Is the annotation package (TxDb.Hsapiens.UCSC.hg38.knownGene)…
Comment: Merge Replicates vs Mixed Model by abadgerw • 0
@gabrielhoffman any insight?
Comment: makeContrastsDream for Interaction by abadgerw • 0
@gabrielhoffman any insight?
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta by Michael Love 42k
That is the rows that did converge.
Votes
A: Some questions for remove batch effect by using mnnCorrect
A: Recommendations for combining multiple 10x runs into one SingleCellExperiment
Answer: [How to construct a model.matrix ]
Answer: Handling biological replicates in DESeq2
Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
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