Bioconductor VariantFiltering

Showing : VariantFiltering • reset

votes

replies

1.0k

views

VariantAnnotation VariantFiltering

19 months ago Bogdan ▴ 670

votes

645

views

VariantFiltering

updated 22 months ago by Robert Castelo ★ 3.4k • written 22 months ago by Andrew Beggs ▴ 90

votes

2.4k

views

RNAseq123 VariantFiltering Alignment VariantAnnotation

updated 2.5 years ago by James W. MacDonald 68k • written 2.5 years ago by Mohamed ▴ 30

votes

replies

1.7k

views

bioconductor variantfiltering

7.7 years ago Claus.Hultschig • 0

votes

replies

1.8k

views

variantannotation variantfiltering

updated 8.1 years ago by Michael Lawrence ★ 11k • written 8.1 years ago by Bogdan ▴ 670

votes

1.3k

views

VariantFiltering

9.8 years ago claire.simpson • 0

votes

replies

1.7k

views

sequencing transcription variantfiltering annotation News

9.9 years ago Matthew Ritchie ▴ 1000

vote

1.5k

views

variantfiltering phastcons

updated 10.0 years ago by Robert Castelo ★ 3.4k • written 10.0 years ago by Stefanie Tauber ▴ 40

votes

replies

1.9k

views

VariantFiltering VariantFiltering

11.0 years ago Robert Castelo ★ 3.4k

9 results • Page 1 of 1

Recent ...

Replies

Comment: Module membership vs gene significance result and Modules-trait relationships re by Vinaya • 0

Hi. I am having the same issue, and haven't found a solution still.

Comment: Feature Counts - potential bug with outfile.jcounts by Tom • 0

[Penistone Locksmith][1] I think that would be a great idea; a novel junction to annotated junction proximity output column. So if the nove…

Comment: Filtering after DESeq by caroline.zanchi • 0

I am going to try this right now, thanks !

Comment: Bioconductor 3.20 Release Schedule by randyprice13102000 • 0

This offers much info https://bioconductor.org/checkResults/release/bioc-LATEST/

Comment: Filtering after DESeq by ATpoint ★ 4.8k

The problem is that your prefilter is not group-aware so the behaviour of seeing these sorts of outliers is expected. This is why I always …

Votes

Answer: CluserProfiler message "No gene can be mapped"

A: Minfi issue: return code from pthread_create() is 22

Comment: Filtering after DESeq

Answer: DiffBind; Error: No sites have activity greater than filter value

DiffBind; Error: No sites have activity greater than filter value

Awards • All