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garfield awk unix shell embl-ebi

updated 3.7 years ago by bk11 • 0 • written 5.7 years ago by rodrigo.duarte88 ▴ 40

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deseq2 scp Unix Single-Cell

updated 5.0 years ago by Martin Morgan 25k • written 5.0 years ago by vincent.croset ▴ 20

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keggprofile UNIX error exit

10.1 years ago gregory voisin ▴ 430

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Answer: Normalizing batch effects using technical replicates for DGE analysis between tw by Gordon Smyth 52k

Just fit a model `~condition + experiment` where `condition` has three levels A, B and C. Ideally, use limma and include duplicate correlat…

Comment: Error in get_anno_data(ontology) : ontology not supported yet... by GODseeker • 0

thank u so much ,god bless u,my dear friend.

Comment: Feature Counts - potential bug with outfile.jcounts by chris2.a.white • 0

Hi @gordonsmyth and @weishi, Firstly, thank you for offering your time to develop the junction quantification module further. This is gre…

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0

Hi Tim, Thanks for your reply! Yes, my data is 450K, and it is TCGA methylation data downloaded by TCGAbiolinks. The problem is that I can …

Answer: Error in get_anno_data(ontology) : ontology not supported yet... by Guido Hooiveld ★ 4.1k

Did you check the help page for the function `enrichDO`? Type `?enrichDO`. I am asking, because there it is stated that the argument `ont`…

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Comment: Can we get beta values with DMRcate package

Answer: Can we get beta values with DMRcate package

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