Bioconductor TMixClust

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TMixClust

7 months ago ta_awwad ▴ 10

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TMixClust time series expression analysis

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by kathrin.garschall • 0

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rna-seq tmixclust k-means clustering gene expression genesis

5.1 years ago astridite • 0

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TMixClust confidence interval

6.6 years ago ereister • 0

4 results • Page 1 of 1

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Comment: Newbie Question - adding metadata to an analysis by James W. MacDonald 67k

You don't need to generate an `ExpressionSet`, as you already have a `GeneFeatureSet`, which extends `eSet` and is a better fit for what yo…

Comment: Newbie Question - adding metadata to an analysis by Bryan H • 0

Thanks for the documentation. I have most of it working, except for the most critical step - incorporating the new metadata with the datase…

Comment: Diffbind interpretation of data - fold change by Vera • 0

Thank you for confirming that the foldchange is log2

Comment: Diffbind interpretation of data - fold change by Vera • 0

This solved it!

Comment: Diffbind interpretation of data - fold change by Vera • 0

Perfect! Thank you so much!

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Answer: Considerations behind the choice of RNAseq Differential Expression Analysis Tool

A: goana limma- extract list of DE genes and genes in the enriched GO terms?

Answer: Package `not available for Bioconductor version '3.20'` when it should be