Showing : SNPRelate • reset
0
votes
0
replies
684
views
Database for exploring annotations of the coding genome at variants, such as candidate regulatory SNPs at disease-associated loci.
SNP ExomeSeqData snapcount SNAData SNPRelate
2.4 years ago m610110001 • 0
0
votes
2
replies
1.3k
views
How to project a new vector onto PCA space using snpgdsPCA( )?
SNPRelate
updated 3.0 years ago by ▴ 890 • written 3.0 years ago by • 0
0
votes
1
reply
1.6k
views
SNP annotation
SNPRelate SNP GWASTools Annotation GWASdata
updated 3.1 years ago by ▴ 890 • written 3.3 years ago by • 0
0
votes
0
replies
1.2k
views
SNPRelate handling of missing genotypes
SNPRelate
3.1 years ago serpalma.v ▴ 60
0
votes
0
replies
939
views
#SeqSQC error: Problem while converting vcf format to gds format
SNPRelate gdsfmt SeqSQC
3.4 years ago Bhargavi • 0
0
votes
1
reply
1.3k
views
error when running snpgdsLDpruning: The GDS node "genotype/data" does not exist.
SNPRelate
updated 4.2 years ago by • 0 • written 4.2 years ago by • 0
3
votes
1
reply
1.3k
views
How to add colors to the PCA made using SNPRelate
snprelate
updated 4.5 years ago by 68k • written 4.5 years ago by • 0
1
vote
1
reply
1.0k
views
What does SNPRelate::snpgdsDiss calculate?
SNPRelate
updated 5.7 years ago by ▴ 30 • written 5.7 years ago by • 0
0
votes
1
reply
1.1k
views
Different order of samples in output of snpgdsSlidingWindow to calculate Fst and aggregation method
SNPRelate
updated 5.8 years ago by ▴ 30 • written 5.8 years ago by ▴ 60
1
vote
1
reply
1.9k
views
VCF file does not include snp.id, can I still run SNPRelate for Relatedness Analysis? Data is output from STACKS for mangroves
SNPRelate VCF
updated 5.9 years ago by ▴ 890 • written 5.9 years ago by • 0
1
vote
1
reply
1.2k
views
PCA axis description SNPRelate
SNPRelate PCA
updated 6.0 years ago by ▴ 890 • written 6.0 years ago by ▴ 60
0
votes
1
reply
4.3k
views
SNPrelate, snpgdsFst is excluding all snps on non-autosomes, how can I get it to stop doing that?
snprelate fst
updated 6.4 years ago by ▴ 30 • written 6.4 years ago by • 0
0
votes
1
reply
1.1k
views
Using previously calculated PCs in GENESIS
genesis snprelate
6.5 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
1.6k
views
Write gds in parallel
gds SNPRelate BiocParallel
updated 6.9 years ago by ▴ 30 • written 6.9 years ago by ▴ 40
0
votes
2
replies
1.9k
views
Error converting vcf to gds
snprelate vcf gds
updated 6.9 years ago by ▴ 30 • written 7.0 years ago by • 0
1
vote
2
replies
2.0k
views
Cannot read plink files correctly
snprelate Tutorial
updated 7.8 years ago by ▴ 30 • written 7.8 years ago by • 0
0
votes
1
reply
1.8k
views
SNPRelate Dendrogram Point Colors and Shapes
SNPRelate R
updated 8.7 years ago by ▴ 30 • written 8.7 years ago by • 0
3
votes
2
replies
2.0k
views
Minimum allele frequency (MAF) from a Genomic Data Structure (GDS) file
snprelate GWASTools
updated 8.8 years ago by ▴ 30 • written 8.8 years ago by ▴ 40
0
votes
9
replies
6.9k
views
unable to update mgcv package
mgcv snprelate
updated 9.2 years ago by 25k • written 9.2 years ago by • 0
0
votes
4
replies
2.8k
views
NA values in snpgdsDiss dissimilarity matrix
snprelate
updated 9.3 years ago by ▴ 30 • written 9.3 years ago by ▴ 10
0
votes
0
replies
1.1k
views
RADseq chromosomes unknown
snprelate RADseq Stacks
9.3 years ago clive.darwell • 0
0
votes
0
replies
2.1k
views
GWASTools
Organism GWASTools Organism GWASTools SNPRelate
12.0 years ago Stephanie M. Gogarten ▴ 890
22 results • Page 1 of 1
Recent ...
Replies
Comment: Issue when attempting to use output from DECIPHER IDtaxa (pr2 V5) with dada2/phy by Erik Wright ▴ 150
IDTAXA classification can be performed from training sets with or without assigned ranks. In this case it looks like `LearnTaxa()` was not …
Comment: Understanding "gene ratio" when using plotEnrich(c()) by California Business Journal • 0
Find the latest [California business articles][1] on California Business Journal, covering success stories, market trends, and expert insig…
Comment: GSEA using clusterprofileR by California Business Journal • 0
California Business Journal is a trusted source in [California news media][1], delivering insightful stories on business trends and industr…
Comment: QLF or LRT in edgeR for paired sample designs? by California Business Journal • 0
California Business Journal delivers the latest [California business news][1], featuring industry trends, company insights, and success sto…
Comment: How many of my genes from my gene list are in each KEGG pathway? by California Business Journal • 0
[California Business Journal][1] helps small and medium-sized businesses grow by sharing their stories and providing publishing services fo…
Votes
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
Awards • All
Popular Question to tifaGis • 0
Popular Question to Theo ▴ 10
Popular Question to ramiro.barrantes ▴ 10
Popular Question to shepherl 4.1k
Teacher to Aaron Lun ★ 28k
Locations • All
India, 31 minutes ago
Singapore, 35 minutes ago
Germany, 52 minutes ago
Republic of Ireland, 2 hours ago
United States, 3 hours ago
Traffic: 542 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6