Bioconductor SIFT

Showing : SIFT • reset

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2.3k

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rsids dbsnp SIFT

updated 10.1 years ago by James W. MacDonald 67k • written 10.1 years ago by anastasiya-terskih ▴ 10

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Transcription HapMap PolyPhen SIFT convert genomes ensemblVEP Transcription HapMap SIFT

updated 10.8 years ago by Valerie Obenchain ★ 6.8k • written 10.9 years ago by Thomas Sandmann ▴ 30

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VariantAnnotation Annotation PolyPhen SIFT annotate VariantAnnotation ensemblVEP Annotation

11.0 years ago Valerie Obenchain ★ 6.8k

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1.5k

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Annotation PolyPhen SIFT Annotation PolyPhen SIFT

updated 11.1 years ago by Valerie Obenchain ★ 6.8k • written 11.2 years ago by Robert Castelo ★ 3.4k

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zebrafish PolyPhen SIFT affy genomes zebrafish PolyPhen SIFT affy genomes

11.6 years ago Thomas Maurel ▴ 800

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miRNA GO Caenorhabditis elegans Sus scrofa zebrafish PolyPhen SIFT miRNA GO Sus scrofa

12.5 years ago Thomas Maurel ▴ 800

6 results • Page 1 of 1

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Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by dseauer • 0

Thank you so much for all of your help! I really appreciate it!

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by Gordon Smyth 51k

Thanks for extra info, but be careful that the Bioconductor support site requires code to be an markdown format. Copying code with prompts …

Comment: Limma- Print-tip loess normalisation-printer layout information does not match M by dseauer • 0

Thank you so much for your reply! I am sincerely sorry- of course I do not have multiple GAL files- just one- I meant gpr files! I am so so…

Comment: Is it possible to parallelise saveHDF5SummarizedExperiment by Stefano Mangiola ▴ 20

Thansk Herve', I will try. For reference this is the parallelization implementation of zellkonverter, to save anndata from SCE https://gi…

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore by Jason • 0

Any update on the resolution to this? I'm having the same issue with another species.

Votes

A: Recommendations for combining multiple 10x runs into one SingleCellExperiment

Answer: Handling biological replicates in DESeq2

Comment: biomaRt rnorvegicus_gene_ensembl not available anymore

biomaRt rnorvegicus_gene_ensembl not available anymore

A: Does edgeR need to specify reference group?

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Commentator to James W. MacDonald 67k

Popular Question to Stefano Mangiola ▴ 20