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Rgraphviz
•
reset
0
votes
0
replies
436
views
Rgraphviz - exported (toFile) dot file loses colour and label information
Rgraphviz
15 months ago
sterlinggunn01
• 0
0
votes
2
replies
1.1k
views
Rgraphviz installation: DLL problem?
Rgraphviz
Rgraphviz
written 15.1 years ago by
Gustavo Lacerda
▴ 10
1
vote
1
reply
2.3k
views
[SOLVED] Problem with the installation of Rgraphviz
Graphviz
Rgraphviz
3.2 years ago
c.bell.lu
• 0
0
votes
1
reply
784
views
Installation bugs in Rgraphviz
Rgraphviz
3.6 years ago
Ruoshi
• 0
1
vote
3
replies
1.9k
views
Installation of Rgraphviz fails - missing gvc.h
software error
Rgraphviz
updated 19 months ago by
Pranav
• 0 • written 4.8 years ago by
gvds
• 0
0
votes
1
reply
674
views
R studio abort using rgraphviz when using node labels
rgraphviz
updated 5.0 years ago by
James W. MacDonald
68k • written 5.0 years ago by
sterlinggunn01
• 0
2
votes
2
replies
1.7k
views
Rgraphviz installation failing
software error
Rgraphviz
updated 5.1 years ago by
Mike Smith
★ 6.6k • written 5.1 years ago by
mascaretti
• 0
2
votes
7
replies
1.8k
views
Error when installing Rgraphviz on Centos
Rgraphviz
Installation Error
5.4 years ago
jmh5ad
▴ 40
3
votes
4
replies
1.7k
views
Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
RCy3
Cytoscape
Rgraphviz
GOstats
5.8 years ago
Matthew Thornton
▴ 380
0
votes
4
replies
1.9k
views
Rgraphviz installation fails in R with OpenBLAS
Rgraphviz
6.4 years ago
Peter Langfelder
★ 3.0k
0
votes
16
replies
3.8k
views
Rgraphviz installation fails
rgraphviz
7.6 years ago
Giovanni Calice
▴ 160
0
votes
0
replies
1.2k
views
Subgraph attributes in Rgraphviz
rgraphviz
8.4 years ago
steve
• 0
0
votes
2
replies
1.7k
views
Pathview: Exporting non native KEGG pathway ignoring same.layer argument
Pathview
rgraphviz
graphviz
KEGG
updated 8.5 years ago by
Luo Weijun
★ 1.6k • written 8.5 years ago by
guillermo.marco
▴ 30
0
votes
0
replies
2.2k
views
Read Graphviz file .dot in R
r
rstudio
rgraphviz
graphviz
.dot
8.7 years ago
pleaseteachmehowtodoit
• 0
1
vote
1
reply
1.7k
views
Rgraphviz and margins
graph
Rgraphviz
graph
Rgraphviz
updated 9.1 years ago by
sebastian.wolf
• 0 • written 13.7 years ago by
Robert Stojnic
▴ 80
2
votes
4
replies
2.2k
views
Error installing Rgraphviz
installation
rgraphviz
updated 9.3 years ago by
James W. MacDonald
68k • written 9.3 years ago by
prochlorothrix
• 0
0
votes
1
reply
1.6k
views
GOstats and termGraph - Getting all of the plots out of the list
gostats
rgraphviz
updated 9.5 years ago by
Valerie Obenchain
★ 6.8k • written 9.6 years ago by
Matt Thornton
• 0
1
vote
2
replies
1.6k
views
Rgraphviz - issue with edge label when using multiple edges between two nodes
rgraphviz
updated 9.6 years ago by
Kasper Daniel Hansen
★ 6.5k • written 9.6 years ago by
ptaranti
• 0
0
votes
0
replies
1.4k
views
Rgraphviz: nodes with multiple colors
rgraphviz
graphviz
R
9.7 years ago
oliverfrings
• 0
0
votes
3
replies
1.8k
views
generating graph with different rown ames and column names
graph
rgraphviz
updated 10.3 years ago by
Hervé Pagès
16k • written 10.3 years ago by
tyrone.williams.701
• 0
3
votes
6
replies
3.7k
views
Rgraphviz installation problem
rgraphviz
Rgraphviz
10.5 years ago • updated 10.4 years ago
Janet Young
▴ 740
0
votes
0
replies
1.4k
views
Rgraphviz compilation error
graph
Rgraphviz
PROcess
graph
Rgraphviz
PROcess
10.8 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
2
replies
1.9k
views
RGraphiz installation keeps on failing ubuntu 12.04 LTS server
Rgraphviz
Rgraphviz
updated 10.9 years ago by
Frederiek - Maarten Kerckhof
▴ 10 • written 10.9 years ago by
Guest User
★ 13k
2
votes
1
reply
1.9k
views
Rgraphviz install problem.HELP!!!!!
Rgraphviz
Rgraphviz
updated 10.9 years ago by
Kasper Hansen
▴ 30 • written 10.9 years ago by
Guest User
★ 13k
0
votes
12
replies
2.2k
views
Can't install Rgraphviz
Rgraphviz
Rgraphviz
updated 11.0 years ago by
Kasper Daniel Hansen
★ 6.5k • written 11.0 years ago by
enricoferrero
▴ 680
0
votes
5
replies
2.6k
views
Rgraphviz installation issue
Rgraphviz
gage
Rgraphviz
gage
updated 11.2 years ago by
Luo Weijun
★ 1.6k • written 11.2 years ago by
km
▴ 100
0
votes
1
reply
1.8k
views
Rgraphviz multiline edge label
graph
Rgraphviz
graph
Rgraphviz
updated 11.6 years ago by
Vincent J. Carey, Jr.
6.7k • written 11.6 years ago by
Guest User
★ 13k
0
votes
0
replies
1.6k
views
Error in clusterProfiler package with function \"setReadable<-\"
GO
Cancer
Rgraphviz
clusterProfiler
DOSE
GO
Cancer
Rgraphviz
clusterProfiler
DOSE
11.7 years ago
Martin Morgan
25k
0
votes
4
replies
2.0k
views
Problem in installing Rgraphviz
Rgraphviz
BiocInstaller
Rgraphviz
BiocInstaller
updated 11.7 years ago by
Steve Lianoglou
★ 13k • written 11.7 years ago by
Guest User
★ 13k
0
votes
0
replies
1.2k
views
looking for tools to study additive expression effects in gene pathways/networks
Pathways
Rgraphviz
KEGGgraph
Pathways
Rgraphviz
KEGGgraph
11.8 years ago
Christopher T Gregg
▴ 210
0
votes
5
replies
3.0k
views
problem with manipulating graphs created from dot files read by agread()
Rgraphviz
Rgraphviz
updated 12.2 years ago by
Paul Murrell
▴ 30 • written 12.2 years ago by
Alexis Dinno
▴ 20
0
votes
2
replies
1.9k
views
nodeRenderInfo fill property not working with graph/Rgraphviz
graph
Rgraphviz
graph
Rgraphviz
updated 12.3 years ago by
Kasper Daniel Hansen
★ 6.5k • written 12.3 years ago by
Cristobal Fresno Rodríguez
▴ 370
0
votes
1
reply
1.7k
views
Custom node sizes with nodeRenderInfo not work
Rgraphviz
Rgraphviz
updated 12.3 years ago by
florian.hahne@novartis.com
★ 1.6k • written 12.3 years ago by
heyi xiao
▴ 360
0
votes
10
replies
5.8k
views
Rgraphviz: how to read a \"dot\" file?
Rgraphviz
Rgraphviz
updated 12.4 years ago by
Sam Steingold
▴ 30 • written 12.4 years ago by
Guest User
★ 13k
0
votes
0
replies
1.3k
views
BioPAX parsing
Pathways
Network
Rgraphviz
rBiopaxParser
Pathways
Network
Rgraphviz
rBiopaxParser
12.5 years ago
Frank Kramer
▴ 10
0
votes
0
replies
1.1k
views
Rgraphviz (news, testing)
Rgraphviz
Rgraphviz
12.5 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
1
reply
1.3k
views
Problem with Graphvix
Rgraphviz
Rgraphviz
updated 12.6 years ago by
Sean Davis
21k • written 12.6 years ago by
Guest User
★ 13k
0
votes
0
replies
977
views
How to distinguish two overlapped nodes
Rgraphviz
Rgraphviz
12.6 years ago
Guest User
★ 13k
0
votes
3
replies
2.6k
views
Library not loaded: /usr/local/lib/libgvc.5.dylib (Rgraphviz)
Rgraphviz
Rgraphviz
updated 12.6 years ago by
Dan Tenenbaum
★ 8.2k • written 12.6 years ago by
Peng Yu
▴ 950
0
votes
1
reply
1.0k
views
Coordinate Question for Rgraphviz
Rgraphviz
Rgraphviz
updated 12.7 years ago by
Martin Morgan
25k • written 12.7 years ago by
Guest User
★ 13k
0
votes
3
replies
1.7k
views
topGO dependency: Rgrapphviz
GO
Rgraphviz
topGO
GO
Rgraphviz
topGO
updated 12.8 years ago by
Dan Tenenbaum
★ 8.2k • written 12.8 years ago by
Thompson, Kevin
▴ 20
0
votes
6
replies
2.5k
views
error installing Rgraphviz
Rgraphviz
PROcess
BiocInstaller
Rgraphviz
PROcess
BiocInstaller
updated 12.8 years ago by
Dan Tenenbaum
★ 8.2k • written 12.8 years ago by
Mark Miller
▴ 10
0
votes
1
reply
1.6k
views
Rgraphiz
Rgraphviz
Rgraphviz
updated 13.0 years ago by
Dan Tenenbaum
★ 8.2k • written 13.0 years ago by
zahra / زهرا ghayyomi / قیومی
▴ 10
0
votes
1
reply
1.2k
views
Microarray: correlation and Rgraphviz
affy
Rgraphviz
affy
Rgraphviz
updated 13.1 years ago by
Martin Morgan
25k • written 13.1 years ago by
CAM HABI
▴ 10
0
votes
4
replies
3.6k
views
Rgraphviz: fail to plot
Rgraphviz
Rgraphviz
updated 13.1 years ago by
Martin Morgan
25k • written 13.1 years ago by
Guest User
★ 13k
0
votes
1
reply
1.8k
views
Rgraphviz installing problem
Rgraphviz
GLAD
Rgraphviz
GLAD
updated 13.1 years ago by
Martin Morgan
25k • written 13.1 years ago by
Alexandra Federer
▴ 10
0
votes
0
replies
872
views
[R] Fwd: Rgraphviz installation problem
Rgraphviz
Rgraphviz
13.2 years ago
Guest User
★ 13k
0
votes
0
replies
1.3k
views
topGO graph visualization functions crashing under R 2.13.2 with Graphviz 2.20.3.1
GO
Visualization
graph
Rgraphviz
topGO
GO
Visualization
graph
Rgraphviz
topGO
13.4 years ago
Joseph Skaf
▴ 20
0
votes
5
replies
2.3k
views
installing Rgraphviz under CentOS 5.6
Rgraphviz
Rgraphviz
13.4 years ago
Ou, Jianhong
★ 1.3k
0
votes
2
replies
1.2k
views
Rgraphviz Installation Issue
Rgraphviz
Rgraphviz
updated 13.5 years ago by
Kjell Konis
▴ 20 • written 13.5 years ago by
Jayanth Rajan
▴ 20
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Comment: how many significant figures are there in DESeq2 output
by
ATpoint
★ 4.7k
If you want consistency then use a fixed software environment like Docker, wirh fixed code and thresholds that make sense. Rounding to near…
Comment: Compare TCGA-PAAD with GTEx gene expression
by
Jane
• 0
why aren't there any answers?
Comment: Too many significant genes when integrating gtex and tcga
by
Jane
• 0
I encountered the same issue: too many DEGs after limma analysis. It is sad that until today we can still see the paper published where GTE…
Comment: how many significant figures are there in DESeq2 output
by
Matthew McCormack
▴ 180
Thank you for your reply. It is good to know that cutoff of 0.05 means less than 0.05. My concerns are about consistency and reproducibili…
Comment: DiffBind edgeR normalization --- why are the normalization factors all equal to
by
ATpoint
★ 4.7k
No, normalization factors from edgeR rather than size factors from DESeq2 are not proportional, it's a different concept and implementation…
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Unbalanced experiment with multiple samples from each patient.
Answer: Vertical line at A=0, nothing else, on MA plot
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