Showing : RankProd • reset
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Shifted volcano plot after RankProd
rankp RankProd
21 months ago Alessia • 0
1
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3
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1.3k
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How can I run a paired RankProd analysis in R?
RankProd paired RNAseq R
updated 5.3 years ago by 68k • written 5.3 years ago by • 0
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RankProd RP function length error
rankprod rp gr2
updated 6.6 years ago by 43k • written 6.6 years ago by • 0
3
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2
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1.4k
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RankProd throws "is.infinite(data)" error for type "S4" for differential expression analysis
rankprod limma affy bioconductor microarray
updated 7.6 years ago by 68k • written 7.6 years ago by ▴ 20
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7
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1.8k
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RankProd crashing - stability issues?
rankprod crash
7.7 years ago bhgyu ▴ 30
4
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6
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2.7k
views
Bioconductor open source policy
licenses rankprod
updated 7.7 years ago by 68k • written 7.7 years ago by • 0
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1.1k
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Dual channel microarray statistics - Rankproducts did not calculate average FC in log scale.
Dual channel microarray Rankprod
8.0 years ago ggyu1215 • 0
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0
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962
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How does specifying an origin increase the power when using RPadvance?
rankprod microarray bioconductor
8.6 years ago johnanthonyholtjr • 0
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0
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1.1k
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Regarding the package RankProd
microarray rankprod
8.9 years ago sancharisircar24 • 0
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1.2k
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Problem using RankProd
rankprod
updated 9.4 years ago by 68k • written 9.4 years ago by • 0
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1.4k
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RankProd: simultaneously up and down regulated gene
RankProd differential gene expression
9.4 years ago horcsct ▴ 10
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1.3k
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Combine RankProd output Tables (up & down)
RankProd
9.4 years ago horcsct ▴ 10
0
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0
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2.2k
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Error while running RankProd RPadvance from 2 origins - invalid 'row.names' length
rankprod microarray
9.6 years ago sumedharoy • 0
5
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2
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2.6k
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RankProd: Why are p-values=0?
rankprod p-value
updated 9.6 years ago by 68k • written 9.6 years ago by • 0
0
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0
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1.3k
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Possible implementation of two class paired Rank Products in r with package RankProd
RankProd pairedtest bioconductor biologicalreplicates
9.8 years ago svlachavas ▴ 840
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Can Rank-production be applied to test the condition's effects on treatments?
RankProd RankProd
10.6 years ago Guest User ★ 13k
0
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1
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1.6k
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
Normalization probe limma RankProd Normalization probe limma RankProd
updated 10.8 years ago by ▴ 30 • written 10.8 years ago by 52k
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1
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1.9k
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
cdf RankProd cdf RankProd
updated 10.8 years ago by ▴ 30 • written 10.8 years ago by ▴ 190
0
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0
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998
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
RankProd RankProd
10.8 years ago Stefanie Busch ▴ 30
0
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3
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2.5k
views
GEOquerry and virtualArray
RankProd virtualArray RankProd virtualArray
updated 10.9 years ago by 68k • written 10.9 years ago by ▴ 30
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0
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1.4k
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Rankprod- gene appearing in both up and down regulated lists?
RankProd RankProd
11.5 years ago Guest User ★ 13k
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0
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1.1k
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Comparing human and mouse expression directly with RankProd
RankProd RankProd
12.1 years ago Cornwell, Adam ▴ 110
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1.2k
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RankProd absurd results
qPCR RankProd qPCR RankProd
12.2 years ago Guest User ★ 13k
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0
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1.2k
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RankProd analysis for Agilent Single Color array ??
limma RankProd limma RankProd
12.3 years ago Guest User ★ 13k
0
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0
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1.2k
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RankProd paired-sample analysis
RankProd RankProd
12.5 years ago Maider Muñoz ▴ 20
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0
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1.1k
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RankProd package paired-sample sesign
RankProd RankProd
12.5 years ago Maider Muñoz ▴ 20
0
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1
reply
1.2k
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meta-analysis with RankProd
RankProd RankProd
updated 13.0 years ago by ▴ 740 • written 13.0 years ago by ▴ 40
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1
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1.4k
views
Help needed with topGene function of RankProd package
RankProd RankProd
updated 13.4 years ago by ★ 13k • written 13.4 years ago by ▴ 30
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2
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1.7k
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Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd GeneMeta metaArray RankProd GeneMeta metaArray
13.5 years ago boczniak767 ▴ 740
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0
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973
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Gene IDs returned by RankProd topGene command
RankProd RankProd
14.9 years ago Blumenberg, Miroslav ▴ 30
0
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2
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1.6k
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Query related to topGene functionality in RankProd library.
Cancer probe RankProd Cancer probe RankProd
updated 15.2 years ago by ▴ 20 • written 15.2 years ago by ▴ 20
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0
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1.3k
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Query related to topGene functionality in RankProd library.
probe RankProd probe RankProd
15.2 years ago Rohan M ▴ 20
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1
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1.1k
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Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 15.4 years ago by 21k • written 15.4 years ago by ▴ 10
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4
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1.7k
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use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
Annotation cdf limma RankProd Annotation cdf limma RankProd
updated 16.1 years ago by ▴ 70 • written 16.1 years ago by ▴ 190
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2
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1.6k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
cdf limma RankProd cdf limma RankProd
updated 16.1 years ago by 68k • written 16.1 years ago by ▴ 70
0
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0
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1.1k
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Rank Products- breast cancer
Cancer RankProd Cancer RankProd
16.7 years ago Eleni Christodoulou ▴ 150
0
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3
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2.0k
views
Error in RankProd package
limma RankProd limma RankProd
updated 17.9 years ago by ▴ 100 • written 17.9 years ago by ▴ 680
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0
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1.1k
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meaning of pfp in RankProd
RankProd RankProd
18.0 years ago Matthew McCormack ▴ 180
0
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0
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1.2k
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help with RankProd plaase
GO Survival cdf genefilter multtest affy limma RankProd Category affycoretools GO cdf
18.3 years ago Kimpel, Mark W ▴ 890
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3
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1.6k
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Wilcoxon test [was loged data or not loged previous to use normalize.quantile]
Microarray limma RankProd Microarray limma RankProd
updated 19.9 years ago by ▴ 340 • written 19.9 years ago by 52k
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0
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1.0k
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A new package: RankProd
RankProd RankProd
19.9 years ago Fangxin Hong ▴ 810
41 results • Page 1 of 1
Recent ...
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Comment: Web accessibility of Bioconductor.org by Michael Love 43k
hello. Thanks for your post, I'll post this also to the biocwebsite channel on the Bioconductor community slack. https://community-bioc.sl…
Answer: KEGG GSEA using Clusterprofiler - ncbi-geneid missing? by Jessica • 0
Nevermind. Just had to change to Uniprot IDs and it worked :)
Comment: GSVA on RNAseq data by Bob ▴ 10
Hi Robert, We were actually very interested in this problem in particular. It seems that using counts for gene sets with varying gene leng…
Comment: plyranges: find exact GRanges match keeping metadata columns by Michael Love 43k
But I will say if you are doing a lot of these, and require exact match, just making it a simple key -- eg `paste0(start,".",end)` -- seems…
Answer: Comparing Mock vs Infected in WT and Knockout Cells by Michael Love 43k
I recommend for questions about statistical analysis plan to meet with a local statistician or someone familiar with linear models in R. I …
Votes
A: how to extract Granges not overlapping with other ganges?
DESeq2 1.20.0 lfcshrink function
A: LIMMA on RT-PCR data
Answer: Efficiently working with HDF5-backed SingleCellExperiments
Efficiently working with HDF5-backed SingleCellExperiments
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