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RSVSim
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RSVSim insertions from chr1 to chr2
rsvsim
6.2 years ago
FDG
▴ 70
1
vote
1
reply
899
views
correct email address please
RSVSim
rsvsim
7.2 years ago
ashleymaeconard
▴ 10
0
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2
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1.4k
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RSVSim: Is it possible to create more than 10 translocations?
RSVSim
9.6 years ago
chimaeran96
• 0
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Comment: Biomart and ensembl not working?
by
Irene
• 0
It seems to be working for mouse but not for human ensembl <- biomaRt::useEnsembl(biomart = "ensembl", dataset = "hsapiens_gene_ensemb…
Answer: Biomart and ensembl not working?
by
James W. MacDonald
67k
Unfortunately the Ensembl websites can be a bit unstable. The only recourse that I know of is patience and trying later. It appears to be c…
Answer: Unknown gene transcripts after annotatr
by
James W. MacDonald
67k
Both NCBI and Ensembl are constantly pruning IDs. I would assume those have all been removed. [For example][1]. [1]: https://useast.…
Comment: Biomart and ensembl not working?
by
Irene
• 0
I have the same problem for the last ~30h ensembl <- biomaRt::useEnsembl(biomart = "ensembl", dataset = "mmusculus_gene_ensembl", mir…
Answer: DESeq2 Heatmap
by
James W. MacDonald
67k
Two things. First, `scale` is already vectorized, so you don't have to use `apply`. You can instead just do `t(scale(t(mat)))` . Second, th…
Votes
Comment: DESeq2 for single cell pseudobulk processing
C: Limma: how to get same output as topTable but for all the genes ?
A: Processing agilent data by limma
A: Linear regression in DESeq2
Answer: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
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