Bioconductor RIPseeker

Showing : RIPseeker • reset

vote

replies

1.4k

views

RipSeeker RIp-seq

updated 2.7 years ago by James W. MacDonald 67k • written 2.7 years ago by GiV17 • 0

votes

replies

697

views

ripseeker

6.4 years ago fitzgeraldd424 • 0

votes

replies

817

views

ripseeker AgoIP RIPSeek

6.7 years ago ximena.garate • 0

votes

replies

781

views

RIP ripseek ripseeker

6.7 years ago jarod_v6@libero.it ▴ 40

votes

replies

3.2k

views

biomart ensembl ripseeker

updated 6.8 years ago by Mike Smith ★ 6.5k • written 6.8 years ago by António Miguel de Jesus Domingues ▴ 510

vote

1.1k

views

RIPseeker RIP rna-seq

7.5 years ago ofonov ▴ 10

votes

1.7k

views

RIPSeeker ripSeek RIP

7.5 years ago ofonov ▴ 10

votes

replies

902

views

ripseeker

8.1 years ago snamjoshi87 ▴ 40

votes

1.5k

views

ripseeker

8.7 years ago • updated 8.4 years ago xfwang ▴ 20

votes

replies

2.4k

views

RIPSeeker biomart

8.7 years ago xfwang ▴ 20

votes

replies

2.4k

views

GAlignmentPairs galp2gal RIPSeeker

9.6 years ago tomas.bjorklund ▴ 20

vote

replies

972

views

RIPSeeker RIPSeeker

11.0 years ago Davis, Wade ▴ 350

vote

replies

2.8k

views

biomaRt RIPSeeker biomaRt RIPSeeker

updated 11.1 years ago by António Miguel de Jesus Domingues ▴ 510 • written 11.1 years ago by Nicola Cole ▴ 30

votes

replies

1.4k

views

GO biomaRt RIPSeeker GO biomaRt RIPSeeker

11.2 years ago Davis, Wade ▴ 350

votes

replies

1.3k

views

Annotation GO RIPSeeker Annotation GO RIPSeeker

updated 11.2 years ago by Dan Tenenbaum ★ 8.2k • written 11.2 years ago by Davis, Wade ▴ 350

votes

replies

1.3k

views

RIPSeeker RIPSeeker

11.3 years ago Endre Sebestyen ▴ 10

16 results • Page 1 of 1

Recent ...

Replies

Answer: Poor dispersion fit in DESeq2 by Michael Love 42k

The fit (red line) doesn't matter because you have so many samples. Note there is almost no shrinkage. Besides that you may be intereste…

Answer: DESeq2 analysis on 2 plant lines infected with virus, with 2 time points (days p by Michael Love 42k

I'd recommend actually meeting with a local statistician to work out the analysis plan, or someone familiar with linear models in R. I h…

Answer: DESeq2 design and contrasts with 2 drug-treated and one control group by Michael Love 42k

> Now I am interested in comparing the DE genes between the resistant and acute groups, but I am unsure how to account for DMSO in that com…

Answer: Spectra and PSMatch- trouble in reducePSMs, joinSpectraData, or countIdentificat by Laurent Gatto 1.6k

Tthis happens because the sequence spectraVariable is expected to be an atomic vector or a List with elements of length 1, but it's not - s…

Comment: How should I run ssGSEA Hallmark Enrichment Analysis? by Ginny • 0

I think the other side of this question is that the non protein coding genes would be in the "background", they would influence the ranking…

Votes

Answer: ISO a solution to rank-order introns by transcript

Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c

Answer: addPatternDensity in 'qsea' takes too much time

Awards • All