Bioconductor QualityControl

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QualityControl methylationArrayAnalysis

3.0 years ago zusman • 0

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QualityControl Alignment QuasR

updated 4.0 years ago by Michael Stadler ▴ 350 • written 4.0 years ago by h.kozlowski • 0

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747

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folder quality QualityControl AffyExpress

4.1 years ago bastien_chassagnol • 0

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qc qualitycontrol arrayqualitymetrics mouse gene st 2.0 affymetrix

updated 7.4 years ago by James W. MacDonald 67k • written 7.4 years ago by n.lu • 0

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qualitycontrol

updated 7.9 years ago by Mike Smith ★ 6.6k • written 7.9 years ago by XIA.PAN ▴ 20

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shinymethyl minfi epic microarray methylationepic qualitycontrol

7.9 years ago chelsey.ju • 0

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limma one colour agilent microarrays qualitycontrol arrayqualitymetrics

8.2 years ago Bouzid.a ▴ 20

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GWASTools qualitycontrol HumanOmni5-4BeadChip GenomeStudio illumina

updated 8.7 years ago by Stephanie M. Gogarten ▴ 890 • written 8.7 years ago by Lna • 0

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1.7k

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NUSE qualitycontrol microarray

updated 9.0 years ago by Diego Diez ▴ 760 • written 9.0 years ago by jacorvar ▴ 40

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rna-seq GC-Content qualitycontrol

updated 9.2 years ago by Matthew McCormack ▴ 180 • written 9.2 years ago by NS ▴ 60

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limma affy probe qualitycontrol design and contrast matrix

updated 10.0 years ago by Gordon Smyth 52k • written 10.1 years ago by alakatos ▴ 130

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Microarray OneChannel TwoChannel DifferentialExpression Preprocessing QualityControl affy

17.7 years ago Amin Moghaddasi ▴ 130

12 results • Page 1 of 1

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Comment: EdgeR Biological CVs by Joseph • 0

I believe the published study provides answers to your questions. Yunshun Chen and Pedro Baldoni's recent papers on edgeR may also be of in…

Answer: EdgeR Biological CVs by Gordon Smyth 52k

I think your questions are answered by the published paper. You might also like to consult recent papers on edgeR by Yunshun Chen and Pedro…

Answer: Curiously shaped volcano plot with using oarfish + swish to do differential gene by Michael Love 43k

See swish vignette, these are explained.

Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Great thanks for posting the issue and sticking with it Annaleigh

Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0

Awesome possum! Update works!! Thank you so much for the help and guidance!

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Answer: Error in download.file for TCGAutils::symbolsToRanges

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Answer: Limma Interaction Effect with Covariates

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Popular Question to Dario Strbenac ★ 1.5k