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Proteome
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analysis of overexpressed proteins in metaproteomes
Proteomics
ProteoMM
ProteomicsWorkflow
Proteome
written 16 months ago by
ary.lech
▴ 10
2
votes
6
replies
1.3k
views
Biostrings error at retrieving protein sequences
SequenceMatching
Biostrings
DifferentialExpression
Proteome
updated 18 months ago by
Hervé Pagès
16k • written 18 months ago by
nromerov
• 0
0
votes
1
reply
661
views
catagorization of proteins
Proteome
ProtGenerics
written 2.5 years ago by
bansalheena10
• 0
0
votes
0
replies
798
views
Outliers
Proteomics
Proteome
updated 2.5 years ago by
ATpoint
★ 4.8k • written 2.5 years ago by
bansalheena10
• 0
0
votes
0
replies
1.0k
views
ProteoMM analysis with two replicates
shotgunproteomics
Proteome
proteomics
Proteomics
ProteoMM
3.1 years ago
ary.lech
▴ 10
1
vote
7
replies
3.9k
views
How can I convert the "Majority protein IDs" to "Gene names" (example below shown)?
MassSpectrometryData
Proteome
Database
DEP
4.1 years ago
tpm
• 0
1
vote
0
replies
1.8k
views
News:
Online training - Proteomics in R and Bioconductor
ProteomicsWorkflow
proteomics
Proteome
4.3 years ago
info
▴ 10
0
votes
1
reply
1.3k
views
R package to change protein *.msf file to any readable file
Proteome
ProteomicsWorkflow
proteomics
updated 4.4 years ago by
swbarnes2
★ 1.4k • written 4.4 years ago by
yueli7
▴ 20
0
votes
5
replies
2.7k
views
mRNA-seq cross-species analysis, is it possible?
Genetics
Normalization
Proteome
DESeq
Genetics
Normalization
Proteome
DESeq
updated 13.7 years ago by
Davis McCarthy
▴ 20 • written 13.7 years ago by
mali salmon
▴ 370
0
votes
0
replies
963
views
BSgenome data package of the human proteome: Does it exist?
Proteome
Proteome
15.5 years ago
Tillinghast, Guy, M.D.
▴ 30
0
votes
2
replies
1.9k
views
I: Two way anova or manova?
Proteome
Proteome
updated 17.7 years ago by
Mª José Nueda
▴ 90 • written 17.7 years ago by
simonegri@alice.it
▴ 20
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Answer: Origin of the labels for the SingleCellMultiModal dataset
by
ATpoint
★ 4.8k
If you check the underlying code a bit you find that there is a file with data sources: ```r modes_file <- system.file("extdata", "metadat…
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
ATpoint
★ 4.8k
That plot looks extremely worrying. You have very unbalanced DE profiles and clearly two populations of peaks on the right. I would make su…
Answer: Having Trouble Using CNE12() and CNE21() in CNEr
by
1324087964
• 0
![enter image description here][1] [1]: /media/images/d1a91557-b19e-4fbf-b5a1-c4fd42b9
Comment: [ChIP-seq] DESeq2 on counts matrix from union set of called peaks
by
Luca
• 0
Sorry for reviving this 1 month later, but I was reading about size factor estimation, and just wanted to add my findings if anyone stumble…
Comment: DiffBind can't find a DAR
by
ATpoint
★ 4.8k
"My cake does not look as advertised in the recipe", with this sloppy sentence I hope you understand that you need to give people details, …
Votes
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
Comment: DESeq - help with pair wise comparisons
Answer: Is random access by row index possible for an indexed VCF file?
Answer: Is random access by row index possible for an indexed VCF file?
Answer: SingleR with multiple single cell references
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